dr. M.S. (Matthijs) Berends
9591688811
documentation update
2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends
e1966503ee
unit testing R4.3
2023-05-26 20:37:00 +02:00
dr. M.S. (Matthijs) Berends
8179092c57
add XPT files for SAS software
2023-05-12 10:07:55 +02:00
dr. M.S. (Matthijs) Berends
91fa73dedf
add oxygen tolerance
2023-05-11 21:56:27 +02:00
dr. M.S. (Matthijs) Berends
9de19fdc49
documentation
2023-04-21 10:07:25 +02:00
dr. M.S. (Matthijs) Berends
ad3061c754
unit test
2023-04-15 10:32:37 +02:00
dr. M.S. (Matthijs) Berends
1a02d302d4
Fix translatable strings
2023-04-15 09:32:13 +02:00
dr. M.S. (Matthijs) Berends
1d3d7d40bc
get episode unit tests
2023-02-24 19:54:56 +01:00
dr. M.S. (Matthijs) Berends
8d902410f9
unit tests
2023-02-18 14:56:06 +01:00
dr. M.S. (Matthijs) Berends
8d37c75860
unit tests
2023-02-14 15:59:40 +01:00
dr. M.S. (Matthijs) Berends
a4cd38c433
fix for R < 3.2, expect_warning() on hold
2023-02-14 10:41:01 +01:00
dr. M.S. (Matthijs) Berends
b6d2b1398d
Fix for antibiogram() in R <=3.4
2023-02-13 10:21:43 +01:00
dr. M.S. (Matthijs) Berends
45a9697c84
unit tests
2023-02-12 17:10:48 +01:00
dr. M.S. (Matthijs) Berends
03294c7901
fix for Salmonella group A, unit tests
2023-02-10 16:47:25 +01:00
dr. M.S. (Matthijs) Berends
bc434db835
bring back antibiogram(), without deps
2023-02-10 16:18:00 +01:00
dr. M.S. (Matthijs) Berends
70a7ba0206
fix first isolate
2023-02-10 13:13:17 +01:00
dr. M.S. (Matthijs) Berends
1a0dc4bf46
revert back to pre-antibiogram
2023-02-09 13:07:39 +01:00
dr. M.S. (Matthijs) Berends
822e9de82c
pm update, unit test fix?
2023-02-08 13:48:06 +01:00
dr. M.S. (Matthijs) Berends
75a4c1ef3e
fixes2
2023-02-06 14:34:38 +01:00
dr. M.S. (Matthijs) Berends
9e99e66f01
use dplyr where available, new antibiogram() for WISCA, fixed Salmonella Typhi/Paratyphi
2023-02-06 11:57:22 +01:00
dr. M.S. (Matthijs) Berends
4b133d4c96
unit tests
2023-01-30 17:24:03 +01:00
dr. M.S. (Matthijs) Berends
126afb01a4
unit tests 2
2023-01-24 16:31:00 +01:00
dr. M.S. (Matthijs) Berends
c0d8888ab7
unit tests
2023-01-24 16:09:48 +01:00
dr. M.S. (Matthijs) Berends
7b00b4f34a
unit tests
2023-01-24 14:52:15 +01:00
dr. M.S. (Matthijs) Berends
830c67f1bf
documentation, unit tests
2023-01-24 10:20:27 +01:00
Dr. Matthijs Berends
98e62c9af2
Replace RSI with SIR
2023-01-21 23:47:20 +01:00
dr. M.S. (Matthijs) Berends
24b12024ce
unit test fix
2023-01-20 09:45:03 +01:00
dr. M.S. (Matthijs) Berends
b94bc6c67b
adding mo fixes
2023-01-14 19:50:25 +01:00
dr. M.S. (Matthijs) Berends
cf16bc7de1
unit tests
2023-01-06 13:45:20 +01:00
dr. M.S. (Matthijs) Berends
86e28bafce
add mo_pathogenicity
2023-01-06 13:35:37 +01:00
dr. M.S. (Matthijs) Berends
51c0f0814e
new setup unit tests
2023-01-05 15:03:18 +01:00
dr. M.S. (Matthijs) Berends
f619fb683b
support new mo codes
2022-12-27 15:16:15 +01:00
dr. M.S. (Matthijs) Berends
e493248ea5
unit test and news file
2022-12-21 09:12:53 +01:00
dr. M.S. (Matthijs) Berends
4c42a43f7d
fixes
2022-12-20 22:41:39 +01:00
dr. M.S. (Matthijs) Berends
6f4bb603ec
unit tests
2022-12-20 22:18:50 +01:00
dr. M.S. (Matthijs) Berends
23fe427cbc
Fixes for Salmonella
2022-12-17 14:31:33 +01:00
dr. M.S. (Matthijs) Berends
e7d7b94b3e
no obligatory note on startup
2022-12-09 15:10:49 +01:00
dr. M.S. (Matthijs) Berends
510140fc55
Updated mo_gramstain() to reflect current taxonomy, fixes #83
2022-12-09 10:30:25 +01:00
dr. M.S. (Matthijs) Berends
31fb81c382
revised as.rsi(), fix for mdro()
2022-11-24 20:29:00 +01:00
dr. M.S. (Matthijs) Berends
05d536ebb7
complexes
2022-11-17 15:23:29 +01:00
Dr. Matthijs Berends
496c08d851
Implement extensive support for antiviral agents support ( #77 )
2022-11-13 08:46:10 +01:00
dr. M.S. (Matthijs) Berends
d20caae54b
cleanup
2022-10-31 13:25:41 +01:00
dr. M.S. (Matthijs) Berends
796b972f8a
extend vctrs support
2022-10-31 11:19:06 +01:00
dr. M.S. (Matthijs) Berends
9444ed6d1d
fix antibiotics error
2022-10-30 21:05:46 +01:00
dr. M.S. (Matthijs) Berends
3d9faf89cf
ATC and DDD update
2022-10-29 19:01:23 +02:00
dr. M.S. (Matthijs) Berends
6ad7857d39
fix missing R breakpoints
2022-10-29 14:15:23 +02:00
dr. M.S. (Matthijs) Berends
d10651eb26
cleanup
2022-10-22 10:20:09 +02:00
dr. M.S. (Matthijs) Berends
aa2c0639d0
add confidence intervals ( fixed #70 ), remove combine_IR
2022-10-20 16:08:01 +02:00
dr. M.S. (Matthijs) Berends
85e2fbe4a3
remove warnings from unit tests
2022-10-19 11:47:57 +02:00
Dr. Matthijs Berends
fed3b6440f
Unit test fix
2022-10-19 08:14:38 +02:00
