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dd5a0319ef
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(v1.4.0.9014) bugfix
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2020-11-09 15:18:36 +01:00 |
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d3b1d33210
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(v1.4.0.9013) is_gram_negative/positive update
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2020-11-09 13:07:02 +01:00 |
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423879c034
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(v1.4.0.9012) reference_df fix
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2020-11-05 01:11:49 +01:00 |
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5a607abb36
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(v1.4.0.9011) message formatting
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2020-10-27 15:56:51 +01:00 |
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3d096d96c2
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(v1.4.0.9009) bugfix for older R version
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2020-10-26 15:53:31 +01:00 |
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760d69a3e0
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(v1.4.0.9008) like variations
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2020-10-26 12:23:03 +01:00 |
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f720c9ba0b
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(v1.4.0.9007) bugfix
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2020-10-21 15:28:48 +02:00 |
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8f868388ce
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(v1.4.0.9006) bugfix
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2020-10-21 14:40:00 +02:00 |
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9109b9dd62
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(v1.4.0.9005) bugfix
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2020-10-21 13:07:23 +02:00 |
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ade9f8bafd
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(v1.4.0.9004) bugfix
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2020-10-21 11:50:43 +02:00 |
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2ef7dfc8a3
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(v1.4.0.9003) CoNS update
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2020-10-20 21:00:57 +02:00 |
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ddae8085e1
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(v1.4.0.9002) bugfix
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2020-10-19 20:44:45 +02:00 |
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4e9ccb4435
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(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
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2020-10-19 17:09:19 +02:00 |
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833a1be36d
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(v1.4.0.9000) more extensive unit tests
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2020-10-15 09:46:41 +02:00 |
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28e77680c5
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(v1.4.0) matching score update
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2020-10-08 11:16:03 +02:00 |
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c04dc852cf
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(v1.3.0.9039) lifecycle updates, added excess kurtosis
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2020-10-04 21:02:16 +02:00 |
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baf510183c
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(v1.3.0.9038) prefinal 1.4.0
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2020-10-04 19:26:43 +02:00 |
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3136bc54aa
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(v1.3.0.9037) pre-release
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2020-09-30 10:54:23 +02:00 |
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ac1c78c793
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(v1.3.0.9036) documentation fix
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2020-09-30 10:24:53 +02:00 |
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4e0374af29
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(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
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2020-09-29 23:35:46 +02:00 |
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68e6e1e329
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(v1.3.0.9034) eucast_rules summary fix
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2020-09-29 10:40:25 +02:00 |
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36ec8b0d81
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(v1.3.0.9033) skimr fix
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2020-09-28 11:00:59 +02:00 |
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519aada54f
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(v1.3.0.9032) support skimr
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2020-09-28 01:08:55 +02:00 |
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22f6ceb3e4
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(v1.3.0.9031) matching score update
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2020-09-26 16:51:17 +02:00 |
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050a9a04fb
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(v1.3.0.9030) matching score update
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2020-09-26 16:26:01 +02:00 |
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9667c2994f
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(v1.3.0.9029) eucast rules fix, unique()
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2020-09-25 14:44:50 +02:00 |
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1d982a82b4
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(v1.3.0.9028) eucast fix
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2020-09-24 12:38:13 +02:00 |
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027215ed94
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(v1.3.0.9027) unit tests
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2020-09-24 00:50:23 +02:00 |
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c19095a3d5
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(v1.3.0.9026) eucast expert rules 3.2
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2020-09-24 00:30:11 +02:00 |
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a1411ddafc
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(v1.3.0.9025) optimalisation
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2020-09-19 15:15:57 +02:00 |
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2f0186ace2
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(v1.3.0.9024) optimalisation
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2020-09-19 12:57:51 +02:00 |
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d049cce69b
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(v1.3.0.9023) optimalisation
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2020-09-19 11:54:01 +02:00 |
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4e40e42011
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(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
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2020-09-18 16:05:53 +02:00 |
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89401ede9f
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(v1.3.0.9021) typo
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2020-09-14 20:41:19 +02:00 |
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ab60f613aa
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(v1.3.0.9020) fix for uncertainty in as.mo()
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2020-09-14 19:41:48 +02:00 |
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354c606d6a
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(v1.3.0.9019) small fix
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2020-09-14 14:08:07 +02:00 |
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7b6dd676f7
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(v1.3.0.9018) language corrections
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2020-09-14 12:21:23 +02:00 |
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0f6760d427
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(v1.3.0.9017) small fix
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2020-09-12 13:54:21 +02:00 |
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3ff871afeb
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(v1.3.0.9016) mo_uncertainties() overhaul
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2020-09-12 08:49:01 +02:00 |
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68e9cb78e9
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(v1.3.0.9015) as.mo() speedup for valid taxonomic names
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2020-09-03 20:59:21 +02:00 |
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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18e52f2725
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(v1.3.0.9013) data sets vignette update
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2020-08-29 21:52:51 +02:00 |
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4f72b3bfc4
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(v1.3.0.9012) data sets vignette update
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2020-08-29 21:41:46 +02:00 |
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50b953b141
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(v1.3.0.9011) suggests pkg update
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2020-08-29 12:04:23 +02:00 |
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74a172ef55
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(v1.3.0.9010) S3 extensions without dependencies
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2020-08-28 21:55:47 +02:00 |
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81af0b001c
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(v1.3.0.9009) documentation update
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2020-08-26 16:13:40 +02:00 |
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9b8db57c65
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(v1.3.0.9008) also tibble printing for ab
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2020-08-26 15:34:12 +02:00 |
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5e45fdcf2a
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(v1.3.0.9007) tibble printing
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2020-08-26 11:33:54 +02:00 |
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c8c8bb4e3a
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(v1.3.0.9006) website update
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2020-08-21 11:40:13 +02:00 |
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818d0441e0
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(v1.3.0.9005) website update
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2020-08-17 21:49:58 +02:00 |
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dab017a50f
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(v1.3.0.9004) data sets, as.disk() improvement
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2020-08-16 21:38:42 +02:00 |
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e73f0e211c
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(v1.3.0.9003) as.rsi() speed improvement
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2020-08-15 12:54:47 +02:00 |
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08d62bb5d5
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(v1.3.0.9002) intrinsic_resistant data set
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2020-08-14 13:36:10 +02:00 |
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7d16bec21f
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(v1.3.0.9001) website update
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2020-08-10 12:46:03 +02:00 |
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0d9602a6a9
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(v1.3.0.9000) support across() in as.rsi()
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2020-08-10 11:44:58 +02:00 |
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791bb6d33f
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(v1.3.0) remove vignettes from CRAN
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2020-07-31 11:39:56 +02:00 |
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8ff46eefe9
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(v1.3.0) small MIC fix
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2020-07-30 12:37:01 +02:00 |
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ea4e5e5b81
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(v1.3.0) v1.3.0
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2020-07-29 13:48:50 +02:00 |
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de0f7b8950
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(v1.2.0.9040) conserve_capped_values for as.rsi()
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2020-07-29 12:47:58 +02:00 |
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e7def0aa4c
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(v1.2.0.9039) conserve_capped_values for as.rsi()
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2020-07-29 11:46:59 +02:00 |
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453f7f210b
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(v1.2.0.9038) CLSI 2019 fix
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2020-07-29 10:33:47 +02:00 |
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1b65d76cfb
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(v1.2.0.9037) survey on website
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2020-07-28 18:39:57 +02:00 |
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ab2b359e6b
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(v1.2.0.9036) unit test fix
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2020-07-22 12:29:51 +02:00 |
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09fba38ea6
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(v1.2.0.9035) as.mo() speed improvement
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2020-07-22 10:24:23 +02:00 |
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6ab468362d
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(v1.2.0.9034) code cleaning
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2020-07-13 09:17:24 +02:00 |
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c0cf7ab02b
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(v1.2.0.9033) speed improvement mdro(), filter_ab_class()
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2020-07-12 11:43:31 +02:00 |
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1d66b5c43c
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(v1.2.0.9032) Permanently move to GitHub
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2020-07-09 20:07:39 +02:00 |
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a438dcc884
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(v1.2.0.9031) GitHub Actions
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2020-07-09 16:11:56 +02:00 |
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7baa9d3658
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(v1.2.0.9030) GitHub Actions
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2020-07-09 14:12:11 +02:00 |
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cf3c3ee8f7
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(v1.2.0.9029) GitHub actions
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2020-07-08 22:55:17 +02:00 |
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d39d32448b
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(v1.2.0.9028) GitHub actions
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2020-07-08 20:43:25 +02:00 |
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5195e0b9da
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(v1.2.0.9027) move to github
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2020-07-08 17:48:57 +02:00 |
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76fc8e1b14
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(v1.2.0.9026) move to github
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2020-07-08 14:48:06 +02:00 |
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2134fc76e2
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(v1.2.0.9025) AMR calculation speed improvement
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2020-07-03 12:14:41 +02:00 |
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46cf423eab
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(v1.2.0.9024) AMR calculation speed improvement
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2020-07-03 10:51:55 +02:00 |
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152ac5bcad
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(v1.2.0.9023) ab_from_text() improvement
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2020-07-02 21:12:52 +02:00 |
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298e67a45b
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(v1.2.0.9022) as.ab() improvement
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2020-07-01 16:21:36 +02:00 |
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afc660dc33
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(v1.2.0.9021) only progressbar in interactive sessions
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2020-07-01 11:51:26 +02:00 |
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cc6ce0a938
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(v1.2.0.9020) ab_from_text() improvement
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2020-07-01 11:23:05 +02:00 |
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329a0eb0b6
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(v1.2.0.9019) ab_from_text() dose and administration
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2020-07-01 11:07:01 +02:00 |
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240d817b4e
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(v1.2.0.9018) ab_from_text() improvement
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2020-06-26 13:15:46 +02:00 |
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4f6f056077
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(v1.2.0.9017) ab_from_text() improvement
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2020-06-26 12:31:27 +02:00 |
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b31003c0b6
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(v1.2.0.9016) fix in rsi_calc()
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2020-06-26 10:21:22 +02:00 |
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033ca49817
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(v1.2.0.9015) ab_from_text()
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2020-06-25 19:20:50 +02:00 |
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344bbd57f4
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(v1.2.0.9014) ab_from_text()
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2020-06-25 17:34:50 +02:00 |
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8a66e475d7
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(v1.2.0.9013) unit test fix
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2020-06-22 13:18:40 +02:00 |
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779a4e8348
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(v1.2.0.9012) mo_domain(), improved error handling
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2020-06-22 12:18:53 +02:00 |
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93a158aebd
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(v1.2.0.9011) mo_domain(), improved error handling
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2020-06-22 11:18:40 +02:00 |
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e88d7853f5
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(v1.2.0.9010) documentation fix
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2020-06-17 21:35:10 +02:00 |
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f18389d5d6
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(v1.2.0.9009) pkg dependency fix
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2020-06-17 16:29:10 +02:00 |
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ac12392da3
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(v1.2.0.9008) ab_class improvement
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2020-06-17 15:14:37 +02:00 |
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c4d7412f36
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(v1.2.0.9007) Tidyverse selections
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2020-06-17 01:39:30 +02:00 |
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4f94e1312f
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(v1.2.0.9006) improve auto col-determination
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2020-06-11 20:03:13 +02:00 |
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352508889c
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(v1.2.0.9005) data set fix
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2020-06-09 16:31:44 +02:00 |
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8b692ecfcf
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(v1.2.0.9004) rsi_df() fix for groups
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2020-06-09 16:18:03 +02:00 |
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40221e5244
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(v1.2.0.9003) better terminal colour support
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2020-06-05 13:56:05 +02:00 |
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2c8d600914
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(v1.2.0.9002) fix for joins
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2020-06-03 14:33:55 +02:00 |
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5dc4c96b7d
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(v1.2.0.9001) filter_ab_class() update
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2020-06-03 11:48:00 +02:00 |
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02d07b9fb3
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(v1.2.0.9000) eucast_rules() fix for tibbles
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2020-06-02 16:05:56 +02:00 |
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b44e2c9202
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v1.2.0
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2020-05-28 16:48:55 +02:00 |
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d9a4b0bcaf
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(v1.1.0.9021) 1st isolates update
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2020-05-28 10:51:56 +02:00 |
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86d44054f0
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(v1.1.0.9020) updated taxonomy
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2020-05-27 16:37:49 +02:00 |
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ae1969b941
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(v1.1.0.9019) mo_source fix
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2020-05-25 01:01:14 +02:00 |
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f5ff2e6634
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(v1.1.0.9018) as.ab() update, added ab_url()
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2020-05-22 20:29:55 +02:00 |
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e467cc103e
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(v1.1.0.9017) as.ab() update, added ab_url()
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2020-05-22 20:15:19 +02:00 |
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1b1e243d14
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(v1.1.0.9016) small fix
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2020-05-21 12:28:57 +02:00 |
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743f9a5364
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(v1.1.0.9015) new default eucast_rules
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2020-05-20 12:00:17 +02:00 |
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5216d2b520
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(v1.1.0.9014) lose dependencies
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2020-05-19 14:16:45 +02:00 |
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cb1814f5ff
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(v1.1.0.9013) lose dependencies
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2020-05-19 13:18:01 +02:00 |
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19703eb5d3
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(v1.1.0.9012) lose dependencies
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2020-05-19 12:08:49 +02:00 |
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218fd08097
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(v1.1.0.9011) lose dependencies
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2020-05-18 13:59:34 +02:00 |
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d659c9baef
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(v1.1.0.9010) lose dependencies
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2020-05-18 11:09:02 +02:00 |
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bf0402a653
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(v1.1.0.9009) lose dependencies
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2020-05-18 10:30:53 +02:00 |
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071bdc5a9e
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(v1.1.0.9008) lose dependencies
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2020-05-17 11:56:12 +02:00 |
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f68d71a5e0
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(v1.1.0.9007) lose dependencies
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2020-05-16 21:40:50 +02:00 |
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df2456b91f
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(v1.1.0.9005) lose dependencies
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2020-05-16 20:08:21 +02:00 |
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7f3da74b17
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(v1.1.0.9004) lose dependencies
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2020-05-16 13:05:47 +02:00 |
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9fce546901
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(v1.1.0.9003) CI fix
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2020-05-01 09:14:32 +02:00 |
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77d8f97e0c
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(v1.1.0.9002) CI fix
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2020-04-30 18:46:29 +02:00 |
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b040185269
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(v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI
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2020-04-29 14:33:44 +02:00 |
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e0f4c93e82
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v1.1.0
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2020-04-17 19:16:30 +02:00 |
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c2ffbd9f95
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(v1.0.1.9009) prepare for next release
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2020-04-15 11:30:28 +02:00 |
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4be54d608c
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(v1.0.1.9008) RIVM abbreviations for drugs
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2020-04-14 20:38:09 +02:00 |
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cde65141d9
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(v1.0.1.9007) small bugfix
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2020-04-14 15:10:09 +02:00 |
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7a6f819232
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(v1.0.1.9006) added generic CLSI rules
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2020-04-14 14:12:31 +02:00 |
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d1cb7d3b6f
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(v1.0.1.9005) as.mo() improvements
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2020-04-13 21:09:56 +02:00 |
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219cff403f
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(v1.0.1.9004) Support dplyr 1.0.0
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2020-03-14 14:05:43 +01:00 |
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77656a676c
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(v1.0.1.9002) PCA unit tests
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2020-03-08 11:18:59 +01:00 |
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9fc858f208
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(v1.0.1.9001) PCA unit tests
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2020-03-08 09:12:11 +01:00 |
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fa0d9c58d9
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(v1.0.1.9000) first PCA implementation
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2020-03-07 21:48:21 +01:00 |
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f444c24ed3
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(v1.0.1) v 1.0.1
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2020-02-23 20:56:11 +01:00 |
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0d5e78b2cf
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(v1.0.0.9007) small doc fix
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2020-02-22 17:03:47 +01:00 |
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0595af2801
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(v1.0.0.9006) fix WARNING
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2020-02-21 21:26:58 +01:00 |
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ea32e9916a
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(v1.0.0.9005) info printing only in interactive mode
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2020-02-21 21:13:38 +01:00 |
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47fe8b7820
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(v1.0.0.9004) add example_isolaten_unclean
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2020-02-21 16:05:19 +01:00 |
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bb3728f023
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(v1.0.0.9003) prepare for short update
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2020-02-21 13:13:34 +01:00 |
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6408911922
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(v1.0.0.9002) fix lintr
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2020-02-20 20:31:42 +01:00 |
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bdb26f624f
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(v1.0.0.9001) add uti to as.rsi()
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2020-02-20 17:21:01 +01:00 |
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c6184a0fb8
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(v0.9.0.9029) add uti to as.rsi()
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2020-02-20 13:19:23 +01:00 |
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c8981a563e
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(v0.9.0.9027) documentation fix
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2020-02-17 15:07:25 +01:00 |
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5e2b294351
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(v0.9.0.9026) update documentation
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2020-02-17 14:38:01 +01:00 |
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11f00f8a0a
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(v0.9.0.9025) update as.rsi documentation
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2020-02-16 22:43:56 +01:00 |
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c7a93af3d0
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(v0.9.0.9024) global vars fix
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2020-02-14 20:03:43 +01:00 |
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9b8b02960e
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(v0.9.0.9023) EUCAST 2020 guidelines
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2020-02-14 19:54:13 +01:00 |
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5a98e6b777
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(v0.9.0.9022) inheritance fix
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2020-02-10 14:18:15 +01:00 |
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b4356a299c
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(v0.9.0.9021) inheritance fix
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2020-02-10 12:25:02 +01:00 |
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c7a76ba713
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(v0.9.0.9020) as.mo() improvement
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2020-02-09 22:04:29 +01:00 |
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4e1c16c5a5
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(v0.9.0.9019) website update
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2020-02-01 15:09:36 +01:00 |
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f152ab9a48
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(v0.9.0.9018) Remove mo_history
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2020-01-31 23:27:38 +01:00 |
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1b80773c22
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(v0.9.0.9017) documentation fix
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2020-01-27 19:30:26 +01:00 |
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a13c62e6e8
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(v0.9.0.9016) Support SNOMED codes
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2020-01-27 19:14:23 +01:00 |
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42b079cdb7
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(v0.9.0.9015) Fix for as.rsi.disk()
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2020-01-27 11:37:00 +01:00 |
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9a3891efe4
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(v0.9.0.9014) Machine reading guidelines
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2020-01-27 11:05:39 +01:00 |
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423d1d3c41
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(v0.9.0.9013) Support for LOINC codes
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2020-01-26 20:38:54 +01:00 |
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449d9bde35
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(v0.9.0.9012) Support for LOINC codes
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2020-01-26 20:20:00 +01:00 |
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19172b1d48
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(v0.9.0.9011) Support R 4.0
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2020-01-15 16:40:34 +01:00 |
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895e97c310
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(v0.9.0.9010) Support R 4.0
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2020-01-15 15:24:08 +01:00 |
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64f5ceef03
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(v0.9.0.9009) antibiotics data set update
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2020-01-08 11:30:33 +01:00 |
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ced1a7b7fa
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(v0.9.0.9008) Happy new year! Add lifecycles
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2020-01-05 17:22:09 +01:00 |
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f4669889e5
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(v0.9.0.9007) website update
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2019-12-27 11:56:54 +01:00 |
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db5dfff0ca
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(v0.9.0.9006) added CITATION file
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2019-12-22 11:43:38 +01:00 |
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ba3ce77f02
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(v0.9.0.9005) as.mo for G. species
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2019-12-21 10:56:06 +01:00 |
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cc8cd043e1
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(v0.9.0.9004) website fix
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2019-12-20 21:06:39 +01:00 |
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2db2a2458a
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(v0.9.0.9003) as.mo() speedup for fullnames
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2019-12-20 15:05:58 +01:00 |
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f7eb6e4107
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(v0.9.0.9002) website updates
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2019-12-16 11:08:25 +01:00 |
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56ce9bf665
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(v0.9.0) website fixes
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2019-11-30 12:01:50 +01:00 |
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bb2ed55842
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(v0.9.0) v0.9.0
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2019-11-29 19:43:23 +01:00 |
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9feef53bde
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(v0.8.0.9037) complete documentation rewrite
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2019-11-28 23:00:37 +01:00 |
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c5f00f4a9f
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(v0.8.0.9036) complete documentation rewrite
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2019-11-28 22:32:17 +01:00 |
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7c28b392b1
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(v0.8.0.9035) add more mo codes
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2019-11-24 22:48:56 +01:00 |
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e53cc4990c
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(v0.8.0.9034) add cid to antivirals
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2019-11-23 12:39:57 +01:00 |
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267320f15f
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(v0.8.0.9033) antivirals data set, cleanup
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2019-11-18 12:10:47 +01:00 |
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67f3f4387b
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(v0.8.0.9032) fix regex error
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2019-11-15 16:50:46 +01:00 |
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09e2730b53
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(v0.8.0.9031) as.mo() improvements
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2019-11-15 15:25:03 +01:00 |
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248b45da71
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(v0.8.0.9030) depend on tidyr >= 1.0.0
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2019-11-11 10:46:39 +01:00 |
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d22834c5b8
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(v0.8.0.9029) cleanup
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2019-11-10 15:50:18 +01:00 |
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54b6322056
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(v0.8.0.9028) examples fix
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2019-11-10 13:17:20 +01:00 |
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59ededa8dc
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(v0.8.0.9027) adding susceptibility() and resistance()
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2019-11-10 12:16:56 +01:00 |
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228a4245cb
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(v0.8.0.9026) appveyor fix
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2019-11-10 09:26:25 +01:00 |
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a8c48cb2d7
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(v0.8.0.9025) appveyor fix
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2019-11-10 09:21:43 +01:00 |
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07f945de53
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(v0.8.0.9024) appveyor fix
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2019-11-10 09:04:18 +01:00 |
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e252f68cdb
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(v0.8.0.9023) appveyor fix
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2019-11-09 17:13:31 +01:00 |
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32e3a98967
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(v0.8.0.9022) update vignettes
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2019-11-09 16:37:41 +01:00 |
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ef640add2d
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(v0.8.0.9021) update vignettes
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2019-11-09 11:33:22 +01:00 |
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e2d05cb1b0
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(v0.8.0.9017) keywords update
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2019-11-06 14:43:23 +01:00 |
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be9a3e6b12
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(v0.8.0.9016) unit test update
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2019-11-05 23:07:05 +01:00 |
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d19c44a25f
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(v0.8.0.9015) unit test update
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2019-11-05 22:42:00 +01:00 |
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a1fd2cd98a
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(v0.8.0.9014) unit test update
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2019-11-05 22:23:45 +01:00 |
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2560aa1a53
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(v0.8.0.9013) unit test update
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2019-11-05 21:52:58 +01:00 |
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5345d2759a
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(v0.8.0.9012) mdro improvement
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2019-11-05 11:28:52 +01:00 |
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fe606e287b
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(v0.8.0.9011) col guess update
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2019-11-04 12:08:08 +01:00 |
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9060233953
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(v0.8.0.9010) mdro bug fix
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2019-11-04 11:35:34 +01:00 |
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0bb531f3e0
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(v0.8.0.9009) unit test
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2019-11-03 22:41:29 +01:00 |
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29e448883d
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(v0.8.0.9008) new verbose mode for MDROs
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2019-11-03 22:24:42 +01:00 |
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09c4b04cd0
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(v0.8.0.9007) Enterobacterales order
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2019-10-30 23:02:50 +01:00 |
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7ff2ad8188
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(v0.8.0.9006) small typos
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2019-10-27 00:31:59 +02:00 |
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412077a6f2
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(v0.8.0.9005) fix unit tests
|
2019-10-26 22:21:26 +02:00 |
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d2e8249edd
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(v0.8.0.9004) added MDR guideline by Magiorakos et al.
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2019-10-26 21:56:41 +02:00 |
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c01dc8a5b7
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(v0.8.0.9003) printing fix for AB columns
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2019-10-23 15:44:11 +02:00 |
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3e5ab53209
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(v0.8.0.9002) eucast_rules() fix for S. maltophilia
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2019-10-23 14:48:25 +02:00 |
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