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Commit Graph

175 Commits

Author SHA1 Message Date
c8698347cb (v1.7.1.9055) added EUCAST 3.3 and all LPSN records numbers 2021-11-29 10:38:38 +01:00
694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
37e6e35ec4 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
93a4734b44 (v1.7.1.9040) Support for Danish 2021-09-29 12:12:35 +02:00
1daa117e9f (v1.7.1.9033) dplyr grouping fix on windows? 2021-08-30 15:01:32 +02:00
d6a916d70b (v1.7.1.9030) unit test 2021-08-29 23:50:45 +02:00
5ccb330b42 (v1.7.1.9018) translation fix 2021-07-11 13:20:45 +02:00
5b5741f681 (v1.7.1.9011) subsetting taxonomy fix 2021-07-04 15:26:50 +02:00
d04e83f494 (v1.7.1.9005) ab class selectors for R-3.0 and R-3.1 2021-06-22 12:16:42 +02:00
556bf0014d (v1.7.1.9003) unit test 2021-06-14 22:37:05 +02:00
7e70403efb (v1.7.1) New CRAN release 2021-06-03 15:19:21 +02:00
bef0f42f66 (v1.7.0.9001) CLSI 2020 guideline 2021-06-01 15:33:06 +02:00
f1d9b489c5 (v1.7.0) unit tests 2021-05-26 14:04:12 +02:00
41d279daa1 (v1.7.0) v1.7.0 2021-05-26 11:10:34 +02:00
ac73a8d849 v1.7.0 2021-05-24 15:29:17 +02:00
b210f1327c (v1.6.0.9055) support codecov again 2021-05-21 20:20:51 +02:00
6920c0be41 (v1.6.0.9047) filter_ab_class() fixes 2021-05-18 11:29:31 +02:00
f33e61bac7 (v1.6.0.9016) website update and c() fixes 2021-05-03 13:06:43 +02:00
6ff5448192 (v1.6.0.9001) support Inf for episodes 2021-04-12 12:35:13 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules 2021-04-07 08:37:42 +02:00
551f99dc8f v1.6.0 2021-03-15 07:23:21 +01:00
ddf88345f1 (v1.5.0.9028) Updated taxonomy until March 2021 2021-03-04 23:28:32 +01:00
daa12ced2c (v1.5.0.9020) translation fix 2021-02-18 23:23:14 +01:00
4a84894f79 (v1.5.0.9016) only_rsi_columns update, documentation 2021-02-08 14:18:42 +01:00
2eca8c3f01 (v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement 2021-02-02 23:57:35 +01:00
20d638c193 (v1.5.0.9013) updated tibble printing colours 2021-01-28 16:09:30 +01:00
24eb4453db (v1.5.0.9011) small dosage update 2021-01-24 23:27:11 +01:00
3b84b8be75 v1.5.0 2021-01-06 11:16:17 +01:00
63a4dda467 (v1.4.0.9056) subsetting ab class selectors for base R 2021-01-03 23:40:05 +01:00
526f8afb08 (v1.4.0.9052) replaced all sapply's with type-safe vapply's 2020-12-28 22:24:33 +01:00
8b52f9b1be (v1.4.0.9047) unit tests 2020-12-27 00:30:28 +01:00
acbd0cf7ca (v1.4.0.9046) get_episode 2020-12-27 00:07:00 +01:00
1faa816090 (v1.4.0.9040) LA-MRSA / CA-MRSA 2020-12-16 16:18:53 +01:00
ac22b8d5c1 (v1.4.0.9038) docu update 2020-12-13 13:44:04 +01:00
c9fc7e8a45 (v1.4.0.9034) MIC printing update 2020-12-09 09:40:50 +01:00
2145f1d1ba (v1.4.0.9033) documentation update 2020-12-08 12:37:25 +01:00
0e1fdb7dd7 (v1.4.0.9027) docu update 2020-11-25 20:26:02 +01:00
15c732703d (v1.4.0.9015) bugfix 2020-11-10 16:35:56 +01:00
28e77680c5 (v1.4.0) matching score update 2020-10-08 11:16:03 +02:00
818d0441e0 (v1.3.0.9005) website update 2020-08-17 21:49:58 +02:00
dab017a50f (v1.3.0.9004) data sets, as.disk() improvement 2020-08-16 21:38:42 +02:00
7d16bec21f (v1.3.0.9001) website update 2020-08-10 12:46:03 +02:00
0d9602a6a9 (v1.3.0.9000) support across() in as.rsi() 2020-08-10 11:44:58 +02:00
1b65d76cfb (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
5195e0b9da (v1.2.0.9027) move to github 2020-07-08 17:48:57 +02:00
76fc8e1b14 (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00
329a0eb0b6 (v1.2.0.9019) ab_from_text() dose and administration 2020-07-01 11:07:01 +02:00
d9a4b0bcaf (v1.1.0.9021) 1st isolates update 2020-05-28 10:51:56 +02:00
86d44054f0 (v1.1.0.9020) updated taxonomy 2020-05-27 16:37:49 +02:00
ae1969b941 (v1.1.0.9019) mo_source fix 2020-05-25 01:01:14 +02:00
e467cc103e (v1.1.0.9017) as.ab() update, added ab_url() 2020-05-22 20:15:19 +02:00
19703eb5d3 (v1.1.0.9012) lose dependencies 2020-05-19 12:08:49 +02:00
218fd08097 (v1.1.0.9011) lose dependencies 2020-05-18 13:59:34 +02:00
219cff403f (v1.0.1.9004) Support dplyr 1.0.0 2020-03-14 14:05:43 +01:00
11f00f8a0a (v0.9.0.9025) update as.rsi documentation 2020-02-16 22:43:56 +01:00
c7a93af3d0 (v0.9.0.9024) global vars fix 2020-02-14 20:03:43 +01:00
c7a76ba713 (v0.9.0.9020) as.mo() improvement 2020-02-09 22:04:29 +01:00
a13c62e6e8 (v0.9.0.9016) Support SNOMED codes 2020-01-27 19:14:23 +01:00
9a3891efe4 (v0.9.0.9014) Machine reading guidelines 2020-01-27 11:05:39 +01:00
449d9bde35 (v0.9.0.9012) Support for LOINC codes 2020-01-26 20:20:00 +01:00
19172b1d48 (v0.9.0.9011) Support R 4.0 2020-01-15 16:40:34 +01:00
ced1a7b7fa (v0.9.0.9008) Happy new year! Add lifecycles 2020-01-05 17:22:09 +01:00
db5dfff0ca (v0.9.0.9006) added CITATION file 2019-12-22 11:43:38 +01:00
2db2a2458a (v0.9.0.9003) as.mo() speedup for fullnames 2019-12-20 15:05:58 +01:00
f7eb6e4107 (v0.9.0.9002) website updates 2019-12-16 11:08:25 +01:00
a7e538e562 (v0.9.0) website fixes 2019-11-30 13:31:12 +01:00
56ce9bf665 (v0.9.0) website fixes 2019-11-30 12:01:50 +01:00
e53cc4990c (v0.8.0.9034) add cid to antivirals 2019-11-23 12:39:57 +01:00
267320f15f (v0.8.0.9033) antivirals data set, cleanup 2019-11-18 12:10:47 +01:00
59ededa8dc (v0.8.0.9027) adding susceptibility() and resistance() 2019-11-10 12:16:56 +01:00
ef640add2d (v0.8.0.9021) update vignettes 2019-11-09 11:33:22 +01:00
666126cd5e (v0.8.0.9001) guideline text on as.rsi() 2019-10-21 14:12:28 +02:00
1b8e2366f7 (v0.8.0.9000) website update 2019-10-16 22:47:48 +02:00
e2aa4f996b (v0.7.1.9075) new microorganism codes 2019-09-18 15:46:09 +02:00
c7be72f0ce (v0.7.1.9069) documentation update 2019-09-01 13:16:57 +02:00
88ee1b7268 (v0.7.1.9068) gramstain to freq() 2019-08-30 14:50:56 +02:00
93be16484b (v0.7.1.9063) septic_patients -> example_isolates 2019-08-27 16:45:42 +02:00
920212e815 (v0.7.1.9056) mo and ab subsetting 2019-08-14 14:57:06 +02:00
7108454ba5 (v0.7.1.9055) algorithm improvements 2019-08-13 16:15:08 +02:00
1d423cca89 (v0.7.1.9035) cephalosporins and unit tests 2019-08-11 19:07:26 +02:00
6598c5615d (v0.7.1.9033) 5000 new fungi 2019-08-09 23:22:10 +02:00
6a349bf757 (v0.7.1.9032) eucast_rules() improvements 2019-08-09 14:28:46 +02:00
85b62aaf8f (v0.7.1.9023) wrong percentage in as.mo() 2019-08-04 17:41:12 +02:00
240f03a672 (v0.7.1.9015) Remove freq() 2019-07-29 13:33:48 +02:00
b15d59cf03 (v0.7.1.9009) note for WHOCC 2019-07-09 11:22:46 +02:00
c57ad26c5b (v0.7.1.9007) mdro update 2019-07-04 15:26:07 +02:00
4bf6a06935 website update 2019-05-23 18:53:18 +02:00
60983a1640 added mdr_tb() 2019-05-23 16:58:59 +02:00
4c3cf85a65 ab_info, other bug fixes 2019-05-16 21:20:00 +02:00
38a4421450 CI tests 2019-05-13 10:10:16 +02:00
68cc7ef0d0 new antibiotics 2019-05-10 16:44:59 +02:00
fbc9191b13 new EUCAST rules algorithm 2019-04-05 18:47:39 +02:00
429814c29b v0.6.0 2019-03-27 11:22:36 +01:00
c6a12266e7 DSMZ data 2019-03-18 14:29:41 +01:00
0c0c6e289b small as.mo fix 2019-03-06 14:39:02 +01:00
2565b60024 rlang dependency, new fungi 2019-02-28 13:56:28 +01:00
41ad7a22c8 mo_rank mo_url, added Tremellales 2019-02-22 22:12:10 +01:00
c2aea67e84 website update 2019-02-22 01:42:35 +01:00
68a9a35ed6 algorithm update 2019-02-21 18:55:52 +01:00
13120f465f website update 2019-02-20 13:57:23 +01:00