 dr. M.S. (Matthijs) Berends
|
e7d7b94b3e
|
no obligatory note on startup
|
2022-12-09 15:10:49 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
56dad34e68
|
update prevalence with new phyla
|
2022-12-09 13:37:08 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ac55aa84de
|
add news
|
2022-12-09 11:15:11 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
510140fc55
|
Updated `mo_gramstain()` to reflect current taxonomy, fixes #83
|
2022-12-09 10:30:25 +01:00 |
Dr. Matthijs Berends
|
6017f81e74
|
Update README.md
|
2022-11-29 19:38:17 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
ba51c2d92f
|
add column to `as.mic()` and `as.disk()` warnings
|
2022-11-28 19:39:52 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
31fb81c382
|
revised `as.rsi()`, fix for `mdro()`
|
2022-11-24 20:29:00 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
05d536ebb7
|
complexes
|
2022-11-17 15:23:29 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
f6862a139d
|
expert rules 12.0
|
2022-11-14 15:20:39 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
7ca44fb756
|
cleanup and new intro logo
|
2022-11-13 13:44:25 +01:00 |
|
Dr. Matthijs Berends
|
496c08d851
|
Implement extensive support for antiviral agents support (#77)
|
2022-11-13 08:46:10 +01:00 |
|
Dr. Matthijs Berends
|
d2edcf51ad
|
Update website.yaml
|
2022-11-12 12:10:33 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8d1679bab3
|
website update
|
2022-11-12 09:44:36 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
af205e2705
|
update collabs
|
2022-11-10 22:07:35 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d2ceebe376
|
website fix
|
2022-11-07 18:48:12 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
2d90218305
|
documentation fix
|
2022-11-05 12:06:40 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
8dc94a9eda
|
documentation fix
|
2022-11-05 09:31:19 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
3b652983b7
|
documentation fix
|
2022-11-05 08:18:06 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d20caae54b
|
cleanup
|
2022-10-31 13:25:41 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
796b972f8a
|
extend vctrs support
|
2022-10-31 11:19:06 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
9444ed6d1d
|
fix antibiotics error
|
2022-10-30 21:05:46 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
d40e0ef20b
|
completely updated `antibiotics`
|
2022-10-30 14:31:45 +01:00 |
|
dr. M.S. (Matthijs) Berends
|
3d9faf89cf
|
ATC and DDD update
|
2022-10-29 19:01:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
fa620f8ebd
|
fix export of lists in `antibiotics` and `antivirals`
|
2022-10-29 16:17:48 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
afdc48db1e
|
fix txt export of microorganisms
|
2022-10-29 16:08:18 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
6ad7857d39
|
fix missing R breakpoints
|
2022-10-29 14:15:23 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
c2801ba7a1
|
new rsi_translation
|
2022-10-22 22:00:15 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d10651eb26
|
cleanup
|
2022-10-22 10:20:09 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
d0b54f640c
|
Update contributors list
|
2022-10-21 21:56:54 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
bfca21bd3f
|
precommit update
|
2022-10-21 19:31:46 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
faca6d608a
|
mean AMR distance
|
2022-10-21 16:02:14 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
178ab5e5ff
|
mean AMR distance
|
2022-10-21 15:59:31 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
4bebba3610
|
fix for scoped dplyr verbs
|
2022-10-21 15:13:19 +02:00 |
|
Dr. Matthijs Berends
|
3102beb241
|
Update check-release.yaml
|
2022-10-21 09:59:09 +02:00 |
|
Dr. Matthijs Berends
|
74bcc41558
|
Move older test versions to Windows
|
2022-10-20 19:39:25 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
aa2c0639d0
|
add confidence intervals (fixed #70), remove `combine_IR`
|
2022-10-20 16:08:01 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
85e2fbe4a3
|
remove warnings from unit tests
|
2022-10-19 11:47:57 +02:00 |
|
Dr. Matthijs Berends
|
fed3b6440f
|
Unit test fix
|
2022-10-19 08:14:38 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
f203928f7e
|
coercion fixes
|
2022-10-19 06:59:36 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3fc39198d0
|
unit test fix
|
2022-10-18 23:03:16 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
e5e6d2200d
|
fix add manual ab
|
2022-10-18 22:53:38 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
ad68b50ecd
|
custom ab fix
|
2022-10-15 15:20:13 +02:00 |
|
Dr. Matthijs Berends
|
85ed7ea5f0
|
more robust install check
|
2022-10-14 15:45:20 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
76bcd3528c
|
move object assignment to AMR_env
|
2022-10-14 13:02:50 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
dfae4c7e7d
|
fast-forward from pull
Merge branch 'main' of https://github.com/msberends/AMR into main
# Conflicts:
# DESCRIPTION
# R/add_custom_antimicrobials.R
|
2022-10-11 10:53:51 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
33227a5d90
|
support ab selectors for manual AB codes
|
2022-10-11 10:49:55 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
57d66cd9d0
|
doc fix
|
2022-10-10 21:38:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
955f9d7020
|
documentation fix
|
2022-10-10 21:03:39 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
3deeedc4b6
|
website fix
|
2022-10-10 20:21:41 +02:00 |
|
dr. M.S. (Matthijs) Berends
|
82e3198315
|
add `add_custom_antimicrobials()`
|
2022-10-10 20:20:39 +02:00 |