Emil Rossing
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74ea6c8c60
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Added support for 'html' in italicize_taxonomy() (#134)
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2024-02-13 13:47:07 +01:00 |
 dr. M.S. (Matthijs) Berends
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83e92fd88c
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docu fix
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2023-12-04 08:19:02 +01:00 |
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dr. M.S. (Matthijs) Berends
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7059568581
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fix scale functions
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2023-12-03 16:51:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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c7461766ce
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Remove RSI from package, add extra MIC scale functions
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2023-12-03 11:34:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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6f417d0ef2
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add `scale_x_mic()`
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2023-12-03 01:06:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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4c11a7bd9c
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v2.1.1
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2023-10-22 15:51:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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ca72a646d0
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scientific notation for MICs
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2023-10-20 15:45:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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bcab4bc9ba
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Fixes #123
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2023-10-20 15:07:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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7cda9e575b
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prepare for CRAN
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2023-10-20 14:51:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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7dc96794be
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fix rounding MICs on R-devel
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2023-07-20 08:24:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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a2cbbf470e
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AMR v2.1.0 pre-release
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2023-07-16 16:18:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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7a4628b73f
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Added C. freundii complex and Y. pseudotuberculosis complex
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2023-07-14 10:49:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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fd480d1a9a
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console hyperlink fix
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2023-07-14 09:50:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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08f7256852
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include unit tests again
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2023-07-13 12:45:14 +01:00 |
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dr. M.S. (Matthijs) Berends
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ddd01f9410
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test to remove unit tests from build
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2023-07-13 09:42:37 +01:00 |
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dr. M.S. (Matthijs) Berends
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eff164ecb1
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indicate unique identifiers
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2023-07-12 21:26:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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ea2a4652e9
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mouse-hover fixes
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2023-07-12 15:27:43 +01:00 |
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dr. M.S. (Matthijs) Berends
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e1b4f99f4f
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breakpoints fixes
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2023-07-12 15:20:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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0c46f61260
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MO group fixes
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2023-07-12 15:04:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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9cf054903b
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version bump
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2023-07-12 11:42:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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7cd9ca274c
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add strep groups to ABCG
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2023-07-12 11:41:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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66eeeb4b88
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cleanup
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2023-07-11 14:29:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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8df1cd8d97
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interpretation fixes
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2023-07-11 09:50:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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5e1221bceb
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unit test
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2023-07-10 19:04:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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dab20c09f6
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unit test
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2023-07-10 18:30:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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1b499bf012
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fixes
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2023-07-10 17:02:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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a4e2e25e3f
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reftbl in plots, speedup for as.sir() and mo_validate
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2023-07-10 16:43:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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70c601ca11
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breakpoints UTI interpretation fix
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2023-07-10 13:41:52 +02:00 |
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dr. M.S. (Matthijs) Berends
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3829311dd3
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random() fix
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2023-07-08 21:00:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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2d97cca6d9
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fix `reference_df` endless loop
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2023-06-26 13:52:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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1d9ee39cc7
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fix for mo codes
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2023-06-22 15:24:18 +02:00 |
Dr. Matthijs Berends
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f065945d7b
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Update clinical breakpoints and fix some `as.mo()` bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
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2023-06-22 15:10:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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9591688811
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documentation update
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2023-05-27 10:39:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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e1966503ee
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unit testing R4.3
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2023-05-26 20:37:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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766db4e21f
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as.mo fix
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2023-05-26 19:20:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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c6135d2082
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updated microorganism codes
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2023-05-26 16:10:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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0bcf55d3b6
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improve `as.mo()`
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2023-05-24 15:55:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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3018fb87a9
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`icu_exclude` in `first_isolate()`, fixes #110
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2023-05-17 22:12:10 +02:00 |
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Dr. Matthijs Berends
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5f9769a4f7
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Add oxygen tolerance
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2023-05-12 10:37:07 +02:00 |
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dr. M.S. (Matthijs) Berends
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8179092c57
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add XPT files for SAS software
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2023-05-12 10:07:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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91fa73dedf
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add oxygen tolerance
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2023-05-11 21:56:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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bf08d136a0
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fix coercing `NA` to custom codes, fixes #107
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2023-05-08 13:04:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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9de19fdc49
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documentation
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2023-04-21 10:07:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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9148a2dcf4
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fix `mo_rank()` for 'unknown' MOs
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2023-04-20 15:20:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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2758615cd0
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version fix
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2023-04-19 00:34:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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02322ac2ee
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Fix PK/PD breakpoints
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2023-04-19 00:31:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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cabffb22fd
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anaerobic codes
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2023-04-17 11:26:19 +02:00 |
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dr. M.S. (Matthijs) Berends
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ad3061c754
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unit test
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2023-04-15 10:32:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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1a02d302d4
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Fix translatable strings
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2023-04-15 09:32:13 +02:00 |