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681fe011fe
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(v2.1.1.9082) algorithm updates
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2024-09-30 18:46:55 +02:00 |
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ac1c40d8bb
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(v2.1.1.9081) HUGE microorganisms update for fungi!
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2024-09-29 22:17:56 +02:00 |
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ddb23b6e73
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(v2.1.1.9071) update veterinary SIR interpretation, add only_fungi
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2024-09-19 11:44:56 +02:00 |
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7258a491b9
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(v2.1.1.9068) fix for mo_url() and as.mo() for synonyms
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2024-07-17 14:29:55 +02:00 |
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640888f408
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(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
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2024-07-16 14:53:17 +02:00 |
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0d8a91db49
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rename pre-commit hook to pre-commit checks (no-check)
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2024-04-23 10:55:48 +02:00 |
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7be4dabbc0
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support veterinary MIC/disk translation
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2024-02-24 15:16:52 +01:00 |
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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2d97cca6d9
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fix reference_df endless loop
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2023-06-26 13:52:02 +02:00 |
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9591688811
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documentation update
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2023-05-27 10:39:22 +02:00 |
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91fa73dedf
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add oxygen tolerance
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2023-05-11 21:56:27 +02:00 |
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bf08d136a0
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fix coercing NA to custom codes, fixes #107
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2023-05-08 13:04:18 +02:00 |
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1a02d302d4
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Fix translatable strings
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2023-04-15 09:32:13 +02:00 |
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262598b8d7
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support for old rsi arguments
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2023-03-11 14:24:34 +01:00 |
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4416394e10
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website update
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2023-02-26 21:26:58 +01:00 |
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bc434db835
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bring back antibiogram(), without deps
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2023-02-10 16:18:00 +01:00 |
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19fd0ef121
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sort sir history
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2023-01-23 15:01:21 +01:00 |
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Dr. Matthijs Berends
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98e62c9af2
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Replace RSI with SIR
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2023-01-21 23:47:20 +01:00 |
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f619fb683b
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support new mo codes
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2022-12-27 15:16:15 +01:00 |
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f0a2cdbf5e
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update mo algorithm
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2022-12-20 16:14:04 +01:00 |
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b1b7534c78
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incorporate Bartlett et al (2022)
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2022-12-19 15:32:41 +01:00 |
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5f3a7694aa
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
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8da2467209
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updated taxonomy
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2022-12-12 00:14:56 +01:00 |
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eed1c14b96
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website update
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2022-12-11 11:44:29 +01:00 |
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56dad34e68
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update prevalence with new phyla
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2022-12-09 13:37:08 +01:00 |
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d40e0ef20b
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
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6ad7857d39
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fix missing R breakpoints
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2022-10-29 14:15:23 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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4d050aef7c
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
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3864ab2fb8
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Feather and Parquet files
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2022-08-26 22:25:15 +02:00 |
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7f981e7778
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(v1.8.1.9013) add Toxoplasma
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2022-06-10 13:15:23 +02:00 |
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1b84564d36
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(v1.8.1.9011) update prevalence of some genera
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2022-06-03 12:43:25 +02:00 |
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18e8525d10
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(v1.8.0.9001) as.mo improvement, fixes #52
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2022-02-26 21:58:23 +01:00 |
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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f406319503
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(v1.7.0.9000) package size
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2021-05-30 22:14:38 +02:00 |
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70b803dbb6
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(v1.6.0.9008) unlike, bugfix for col_mo naming
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2021-04-23 09:59:36 +02:00 |
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daa12ced2c
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(v1.5.0.9020) translation fix
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2021-02-18 23:23:14 +01:00 |
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
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2021-02-17 10:58:13 +01:00 |
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
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2021-02-02 23:57:35 +01:00 |
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8b52f9b1be
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(v1.4.0.9047) unit tests
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2020-12-27 00:30:28 +01:00 |
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28e77680c5
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(v1.4.0) matching score update
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2020-10-08 11:16:03 +02:00 |
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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09fba38ea6
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(v1.2.0.9035) as.mo() speed improvement
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2020-07-22 10:24:23 +02:00 |
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1d66b5c43c
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(v1.2.0.9032) Permanently move to GitHub
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2020-07-09 20:07:39 +02:00 |
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76fc8e1b14
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(v1.2.0.9026) move to github
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2020-07-08 14:48:06 +02:00 |
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d9a4b0bcaf
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(v1.1.0.9021) 1st isolates update
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2020-05-28 10:51:56 +02:00 |
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86d44054f0
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(v1.1.0.9020) updated taxonomy
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2020-05-27 16:37:49 +02:00 |
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d1cb7d3b6f
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(v1.0.1.9005) as.mo() improvements
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2020-04-13 21:09:56 +02:00 |
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219cff403f
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(v1.0.1.9004) Support dplyr 1.0.0
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2020-03-14 14:05:43 +01:00 |
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c7a76ba713
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(v0.9.0.9020) as.mo() improvement
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2020-02-09 22:04:29 +01:00 |
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