Commit Graph

413 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends 453f7f210b (v1.2.0.9038) CLSI 2019 fix 2020-07-29 10:33:47 +02:00
dr. M.S. (Matthijs) Berends 1b65d76cfb (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
dr. M.S. (Matthijs) Berends 09fba38ea6 (v1.2.0.9035) as.mo() speed improvement 2020-07-22 10:24:23 +02:00
dr. M.S. (Matthijs) Berends c0cf7ab02b (v1.2.0.9033) speed improvement mdro(), filter_ab_class() 2020-07-12 11:43:31 +02:00
dr. M.S. (Matthijs) Berends 76fc8e1b14 (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00
dr. M.S. (Matthijs) Berends 152ac5bcad (v1.2.0.9023) ab_from_text() improvement 2020-07-02 21:12:52 +02:00
dr. M.S. (Matthijs) Berends 298e67a45b (v1.2.0.9022) as.ab() improvement 2020-07-01 16:21:36 +02:00
dr. M.S. (Matthijs) Berends 329a0eb0b6 (v1.2.0.9019) ab_from_text() dose and administration 2020-07-01 11:07:01 +02:00
dr. M.S. (Matthijs) Berends 4f6f056077 (v1.2.0.9017) ab_from_text() improvement 2020-06-26 12:31:27 +02:00
dr. M.S. (Matthijs) Berends 344bbd57f4 (v1.2.0.9014) ab_from_text() 2020-06-25 17:34:50 +02:00
dr. M.S. (Matthijs) Berends 8a66e475d7 (v1.2.0.9013) unit test fix 2020-06-22 13:18:40 +02:00
dr. M.S. (Matthijs) Berends 93a158aebd (v1.2.0.9011) mo_domain(), improved error handling 2020-06-22 11:18:40 +02:00
dr. M.S. (Matthijs) Berends e88d7853f5 (v1.2.0.9010) documentation fix 2020-06-17 21:35:10 +02:00
dr. M.S. (Matthijs) Berends ac12392da3 (v1.2.0.9008) ab_class improvement 2020-06-17 15:14:37 +02:00
dr. M.S. (Matthijs) Berends c4d7412f36 (v1.2.0.9007) Tidyverse selections 2020-06-17 01:39:30 +02:00
dr. M.S. (Matthijs) Berends 8b692ecfcf (v1.2.0.9004) rsi_df() fix for groups 2020-06-09 16:18:03 +02:00
dr. M.S. (Matthijs) Berends 5dc4c96b7d (v1.2.0.9001) filter_ab_class() update 2020-06-03 11:48:00 +02:00
dr. M.S. (Matthijs) Berends d9a4b0bcaf (v1.1.0.9021) 1st isolates update 2020-05-28 10:51:56 +02:00
dr. M.S. (Matthijs) Berends 86d44054f0 (v1.1.0.9020) updated taxonomy 2020-05-27 16:37:49 +02:00
dr. M.S. (Matthijs) Berends ae1969b941 (v1.1.0.9019) mo_source fix 2020-05-25 01:01:14 +02:00
dr. M.S. (Matthijs) Berends f5ff2e6634 (v1.1.0.9018) as.ab() update, added ab_url() 2020-05-22 20:29:55 +02:00
dr. M.S. (Matthijs) Berends e467cc103e (v1.1.0.9017) as.ab() update, added ab_url() 2020-05-22 20:15:19 +02:00
dr. M.S. (Matthijs) Berends 743f9a5364 (v1.1.0.9015) new default eucast_rules 2020-05-20 12:00:17 +02:00
dr. M.S. (Matthijs) Berends 5216d2b520 (v1.1.0.9014) lose dependencies 2020-05-19 14:16:45 +02:00
dr. M.S. (Matthijs) Berends 19703eb5d3 (v1.1.0.9012) lose dependencies 2020-05-19 12:08:49 +02:00
dr. M.S. (Matthijs) Berends bf0402a653 (v1.1.0.9009) lose dependencies 2020-05-18 10:30:53 +02:00
dr. M.S. (Matthijs) Berends f68d71a5e0 (v1.1.0.9007) lose dependencies 2020-05-16 21:40:50 +02:00
dr. M.S. (Matthijs) Berends df2456b91f (v1.1.0.9005) lose dependencies 2020-05-16 20:08:21 +02:00
dr. M.S. (Matthijs) Berends 7f3da74b17 (v1.1.0.9004) lose dependencies 2020-05-16 13:05:47 +02:00
dr. M.S. (Matthijs) Berends 5bdece1f9d (v1.1.0.9000) CI fix 2020-04-30 09:05:03 +02:00
dr. M.S. (Matthijs) Berends b040185269 (v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI 2020-04-29 14:33:44 +02:00
dr. M.S. (Matthijs) Berends c2ffbd9f95 (v1.0.1.9009) prepare for next release 2020-04-15 11:30:28 +02:00
dr. M.S. (Matthijs) Berends 4be54d608c (v1.0.1.9008) RIVM abbreviations for drugs 2020-04-14 20:38:09 +02:00
dr. M.S. (Matthijs) Berends 7a6f819232 (v1.0.1.9006) added generic CLSI rules 2020-04-14 14:12:31 +02:00
dr. M.S. (Matthijs) Berends d1cb7d3b6f (v1.0.1.9005) as.mo() improvements 2020-04-13 21:09:56 +02:00
dr. M.S. (Matthijs) Berends 219cff403f (v1.0.1.9004) Support dplyr 1.0.0 2020-03-14 14:05:43 +01:00
dr. M.S. (Matthijs) Berends 77656a676c (v1.0.1.9002) PCA unit tests 2020-03-08 11:18:59 +01:00
dr. M.S. (Matthijs) Berends 9fc858f208 (v1.0.1.9001) PCA unit tests 2020-03-08 09:12:11 +01:00
dr. M.S. (Matthijs) Berends fa0d9c58d9 (v1.0.1.9000) first PCA implementation 2020-03-07 21:48:21 +01:00
dr. M.S. (Matthijs) Berends 0d5e78b2cf (v1.0.0.9007) small doc fix 2020-02-22 17:03:47 +01:00
dr. M.S. (Matthijs) Berends ea32e9916a (v1.0.0.9005) info printing only in interactive mode 2020-02-21 21:13:38 +01:00
dr. M.S. (Matthijs) Berends 47fe8b7820 (v1.0.0.9004) add example_isolaten_unclean 2020-02-21 16:05:19 +01:00
dr. M.S. (Matthijs) Berends bb3728f023 (v1.0.0.9003) prepare for short update 2020-02-21 13:13:34 +01:00
dr. M.S. (Matthijs) Berends bdb26f624f (v1.0.0.9001) add uti to as.rsi() 2020-02-20 17:21:01 +01:00
dr. M.S. (Matthijs) Berends c6184a0fb8 (v0.9.0.9029) add uti to as.rsi() 2020-02-20 13:19:23 +01:00
dr. M.S. (Matthijs) Berends c8981a563e (v0.9.0.9027) documentation fix 2020-02-17 15:07:25 +01:00
dr. M.S. (Matthijs) Berends 5e2b294351 (v0.9.0.9026) update documentation 2020-02-17 14:38:01 +01:00
dr. M.S. (Matthijs) Berends 11f00f8a0a (v0.9.0.9025) update as.rsi documentation 2020-02-16 22:43:56 +01:00
dr. M.S. (Matthijs) Berends c7a93af3d0 (v0.9.0.9024) global vars fix 2020-02-14 20:03:43 +01:00
dr. M.S. (Matthijs) Berends 9b8b02960e (v0.9.0.9023) EUCAST 2020 guidelines 2020-02-14 19:54:13 +01:00
dr. M.S. (Matthijs) Berends c7a76ba713 (v0.9.0.9020) as.mo() improvement 2020-02-09 22:04:29 +01:00
dr. M.S. (Matthijs) Berends 4e1c16c5a5 (v0.9.0.9019) website update 2020-02-01 15:09:36 +01:00
dr. M.S. (Matthijs) Berends f152ab9a48 (v0.9.0.9018) Remove mo_history 2020-01-31 23:27:38 +01:00
dr. M.S. (Matthijs) Berends 1b80773c22 (v0.9.0.9017) documentation fix 2020-01-27 19:30:26 +01:00
dr. M.S. (Matthijs) Berends a13c62e6e8 (v0.9.0.9016) Support SNOMED codes 2020-01-27 19:14:23 +01:00
dr. M.S. (Matthijs) Berends 9a3891efe4 (v0.9.0.9014) Machine reading guidelines 2020-01-27 11:05:39 +01:00
dr. M.S. (Matthijs) Berends 423d1d3c41 (v0.9.0.9013) Support for LOINC codes 2020-01-26 20:38:54 +01:00
dr. M.S. (Matthijs) Berends 449d9bde35 (v0.9.0.9012) Support for LOINC codes 2020-01-26 20:20:00 +01:00
dr. M.S. (Matthijs) Berends 64f5ceef03 (v0.9.0.9009) antibiotics data set update 2020-01-08 11:30:33 +01:00
dr. M.S. (Matthijs) Berends ced1a7b7fa (v0.9.0.9008) Happy new year! Add lifecycles 2020-01-05 17:22:09 +01:00
dr. M.S. (Matthijs) Berends ba3ce77f02 (v0.9.0.9005) as.mo for G. species 2019-12-21 10:56:06 +01:00
dr. M.S. (Matthijs) Berends 56ce9bf665 (v0.9.0) website fixes 2019-11-30 12:01:50 +01:00
dr. M.S. (Matthijs) Berends bb2ed55842 (v0.9.0) v0.9.0 2019-11-29 19:43:23 +01:00
dr. M.S. (Matthijs) Berends 9feef53bde (v0.8.0.9037) complete documentation rewrite 2019-11-28 23:00:37 +01:00
dr. M.S. (Matthijs) Berends c5f00f4a9f (v0.8.0.9036) complete documentation rewrite 2019-11-28 22:32:17 +01:00
dr. M.S. (Matthijs) Berends 7c28b392b1 (v0.8.0.9035) add more mo codes 2019-11-24 22:48:56 +01:00
dr. M.S. (Matthijs) Berends e53cc4990c (v0.8.0.9034) add cid to antivirals 2019-11-23 12:39:57 +01:00
dr. M.S. (Matthijs) Berends 267320f15f (v0.8.0.9033) antivirals data set, cleanup 2019-11-18 12:10:47 +01:00
dr. M.S. (Matthijs) Berends 09e2730b53 (v0.8.0.9031) as.mo() improvements 2019-11-15 15:25:03 +01:00
dr. M.S. (Matthijs) Berends 248b45da71 (v0.8.0.9030) depend on tidyr >= 1.0.0 2019-11-11 10:46:39 +01:00
dr. M.S. (Matthijs) Berends d22834c5b8 (v0.8.0.9029) cleanup 2019-11-10 15:50:18 +01:00
dr. M.S. (Matthijs) Berends 54b6322056 (v0.8.0.9028) examples fix 2019-11-10 13:17:20 +01:00
dr. M.S. (Matthijs) Berends 59ededa8dc (v0.8.0.9027) adding susceptibility() and resistance() 2019-11-10 12:16:56 +01:00
dr. M.S. (Matthijs) Berends e2d05cb1b0 (v0.8.0.9017) keywords update 2019-11-06 14:43:23 +01:00
dr. M.S. (Matthijs) Berends 2560aa1a53 (v0.8.0.9013) unit test update 2019-11-05 21:52:58 +01:00
dr. M.S. (Matthijs) Berends 0bb531f3e0 (v0.8.0.9009) unit test 2019-11-03 22:41:29 +01:00
dr. M.S. (Matthijs) Berends 29e448883d (v0.8.0.9008) new verbose mode for MDROs 2019-11-03 22:24:42 +01:00
dr. M.S. (Matthijs) Berends 09c4b04cd0 (v0.8.0.9007) Enterobacterales order 2019-10-30 23:02:50 +01:00
dr. M.S. (Matthijs) Berends 7ff2ad8188 (v0.8.0.9006) small typos 2019-10-27 00:31:59 +02:00
dr. M.S. (Matthijs) Berends d2e8249edd (v0.8.0.9004) added MDR guideline by Magiorakos et al. 2019-10-26 21:56:41 +02:00
dr. M.S. (Matthijs) Berends 00cdb498a0 (v0.7.1.9102) lintr 2019-10-11 17:21:02 +02:00
dr. M.S. (Matthijs) Berends c8f6b97847 (v0.7.1.9100) bug_drug speed, MIC levels 2019-10-08 22:21:33 +02:00
dr. M.S. (Matthijs) Berends f479dfce60 (v0.7.1.9097) mdro() examples fix 2019-10-07 14:57:27 +02:00
dr. M.S. (Matthijs) Berends 4e9c4c1b4e (v0.7.1.9096) German guideline for mdro() 2019-10-07 14:32:06 +02:00
dr. M.S. (Matthijs) Berends 8bc4081b03 (v0.7.1.9092) as.ab() improvements 2019-10-04 15:36:12 +02:00
dr. M.S. (Matthijs) Berends edb599ae0b (v0.7.1.9091) percentage from clean pkg 2019-09-30 16:45:36 +02:00
dr. M.S. (Matthijs) Berends 99d0fe76dd (v0.7.1.9088) bug_drug improvement 2019-09-25 15:43:22 +02:00
dr. M.S. (Matthijs) Berends a8c6b8f9c4 (v0.7.1.9082) CI fix 2019-09-23 14:37:24 +02:00
dr. M.S. (Matthijs) Berends 64d9829030 (v0.7.1.9081) bug_drug fixes 2019-09-23 13:53:50 +02:00
dr. M.S. (Matthijs) Berends 66d405ff57 (v0.7.1.9080) new LIS codes 2019-09-22 17:19:59 +02:00
dr. M.S. (Matthijs) Berends 40e6b3e8f6 (v0.7.1.9077) mo codes fix 2019-09-20 14:18:29 +02:00
dr. M.S. (Matthijs) Berends 3596adb295 (v0.7.1.9076) mo codes 2019-09-20 12:33:05 +02:00
dr. M.S. (Matthijs) Berends e2aa4f996b (v0.7.1.9075) new microorganism codes 2019-09-18 15:46:09 +02:00
dr. M.S. (Matthijs) Berends 398c5bdc4f (v0.7.1.9073) as.mo() self-learning algorithm 2019-09-15 22:57:30 +02:00
dr. M.S. (Matthijs) Berends cd178ee569 (v0.7.1.9072) key_antibiotics() for foreign systems 2019-09-12 15:08:53 +02:00
dr. M.S. (Matthijs) Berends b5d2a08401 (v0.7.1.9071) p_symbol() 2019-09-03 09:47:39 +02:00
dr. M.S. (Matthijs) Berends 06b6266366 (v0.7.1.9070) na.rm for age(), age_groups() 2019-09-02 15:17:41 +02:00
dr. M.S. (Matthijs) Berends e2b78fa428 (v0.7.1.9066) bug-drug fix 2019-08-27 23:00:00 +02:00
dr. M.S. (Matthijs) Berends 248638ad91 (v0.7.1.9065) bug-drug fix 2019-08-27 22:41:09 +02:00
dr. M.S. (Matthijs) Berends f3276592b7 (v0.7.1.9064) bug-drug fix 2019-08-27 19:15:04 +02:00