dr. M.S. (Matthijs) Berends
|
06302d296a
|
(v1.6.0.9062) code consistency
|
2021-05-24 00:06:28 +02:00 |
dr. M.S. (Matthijs) Berends
|
07939b1a14
|
(v1.6.0.9061) age() update
|
2021-05-23 23:11:16 +02:00 |
dr. M.S. (Matthijs) Berends
|
04ef5b28e7
|
(v1.6.0.9050) printing NA in custom_eucast_rules()
|
2021-05-20 10:10:40 +02:00 |
dr. M.S. (Matthijs) Berends
|
2413efd5c1
|
(v1.6.0.9048) ab selectors overhaul
|
2021-05-19 22:55:42 +02:00 |
dr. M.S. (Matthijs) Berends
|
6920c0be41
|
(v1.6.0.9047) filter_ab_class() fixes
|
2021-05-18 11:29:31 +02:00 |
dr. M.S. (Matthijs) Berends
|
cfb7df823e
|
(v1.6.0.9044) betalactams() selector
|
2021-05-18 00:53:04 +02:00 |
dr. M.S. (Matthijs) Berends
|
be49131ed7
|
(v1.6.0.9043) translation update
|
2021-05-17 19:43:01 +02:00 |
dr. M.S. (Matthijs) Berends
|
aeea00881e
|
(v1.6.0.9023) new unit test flow
|
2021-05-13 19:31:47 +02:00 |
dr. M.S. (Matthijs) Berends
|
655b813e99
|
(v1.6.0.9022) unit test fix
|
2021-05-13 15:56:12 +02:00 |
dr. M.S. (Matthijs) Berends
|
29dbfa2f49
|
(v1.6.0.9021) join functions update
|
2021-05-12 18:15:03 +02:00 |
dr. M.S. (Matthijs) Berends
|
5679ccdaf9
|
(v1.6.0.9017) extra system codes
|
2021-05-04 12:47:33 +02:00 |
dr. M.S. (Matthijs) Berends
|
12a8d59869
|
(v1.6.0.9015) italicise_taxonomy
|
2021-05-03 10:47:32 +02:00 |
dr. M.S. (Matthijs) Berends
|
a9fd4aa49f
|
(v1.6.0.9013) website update
|
2021-04-29 17:16:30 +02:00 |
dr. M.S. (Matthijs) Berends
|
5e06b20d43
|
(v1.6.0.9012) unit tests
|
2021-04-27 11:28:17 +02:00 |
dr. M.S. (Matthijs) Berends
|
c5fff1c95c
|
(v1.6.0.9011) unit tests
|
2021-04-27 10:27:13 +02:00 |
dr. M.S. (Matthijs) Berends
|
93683a4ae2
|
(v1.6.0.9010) big first_isolate() update
|
2021-04-26 23:57:37 +02:00 |
dr. M.S. (Matthijs) Berends
|
5f9e7bd3ee
|
(v1.6.0.9009) key_antibiotics update
|
2021-04-23 16:13:26 +02:00 |
dr. M.S. (Matthijs) Berends
|
70b803dbb6
|
(v1.6.0.9008) unlike, bugfix for col_mo naming
|
2021-04-23 09:59:36 +02:00 |
dr. M.S. (Matthijs) Berends
|
c6289c3fc3
|
(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
|
2021-04-20 10:46:17 +02:00 |
dr. M.S. (Matthijs) Berends
|
de66eccf43
|
(v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi
|
2021-04-16 14:59:57 +02:00 |
dr. M.S. (Matthijs) Berends
|
00d3e437a8
|
(v1.6.0.9003) like() fix
|
2021-04-16 11:41:05 +02:00 |
dr. M.S. (Matthijs) Berends
|
6ff5448192
|
(v1.6.0.9001) support Inf for episodes
|
2021-04-12 12:35:13 +02:00 |
dr. M.S. (Matthijs) Berends
|
7a3139f7cc
|
(v1.6.0.9000) custom EUCAST rules
|
2021-04-07 08:37:42 +02:00 |
dr. M.S. (Matthijs) Berends
|
551f99dc8f
|
v1.6.0
|
2021-03-15 07:23:21 +01:00 |
dr. M.S. (Matthijs) Berends
|
4e0a9533ad
|
(v1.5.0.9041) SNOMED update
|
2021-03-11 21:42:30 +01:00 |
dr. M.S. (Matthijs) Berends
|
8d6ceb6a15
|
(v1.5.0.9040) removal of isolate_identifier
|
2021-03-08 09:44:17 +01:00 |
dr. M.S. (Matthijs) Berends
|
a7c9b4c295
|
(v1.5.0.9039) handle first isolates for missing antibiograms
|
2021-03-08 02:38:32 +01:00 |
dr. M.S. (Matthijs) Berends
|
450bbe5fb7
|
(v1.5.0.9034) unit test fix
|
2021-03-07 21:16:45 +01:00 |
dr. M.S. (Matthijs) Berends
|
850c123de7
|
(v1.5.0.9032) All group generics for MICs
|
2021-03-07 13:52:39 +01:00 |
dr. M.S. (Matthijs) Berends
|
91dd755cac
|
(v1.5.0.9031) math processing of MICs
|
2021-03-05 15:36:39 +01:00 |
dr. M.S. (Matthijs) Berends
|
0e0e3c4ffa
|
(v1.5.0.9029) added missing families and orders
|
2021-03-05 01:31:46 +01:00 |
dr. M.S. (Matthijs) Berends
|
ddf88345f1
|
(v1.5.0.9028) Updated taxonomy until March 2021
|
2021-03-04 23:28:32 +01:00 |
dr. M.S. (Matthijs) Berends
|
41f94cde97
|
(v1.5.0.9027) website update
|
2021-02-26 12:11:29 +01:00 |
dr. M.S. (Matthijs) Berends
|
1737d56ae4
|
(v1.5.0.9026) vignette update, support for GISA
|
2021-02-25 12:31:12 +01:00 |
dr. M.S. (Matthijs) Berends
|
a673407904
|
(v1.5.0.9025) big plot and ggplot generics update
|
2021-02-25 10:33:08 +01:00 |
dr. M.S. (Matthijs) Berends
|
5ef8cb41a7
|
(v1.5.0.9021) improve speed of %like%
|
2021-02-21 20:15:09 +01:00 |
dr. M.S. (Matthijs) Berends
|
601ea7377c
|
(v1.5.0.9019) use functions without loading AMR pkg
|
2021-02-17 10:58:13 +01:00 |
dr. M.S. (Matthijs) Berends
|
4a84894f79
|
(v1.5.0.9016) only_rsi_columns update, documentation
|
2021-02-08 14:18:42 +01:00 |
dr. M.S. (Matthijs) Berends
|
8fda473e49
|
(v1.5.0.9015) unit test fix, grouped first isolates
|
2021-02-04 16:48:16 +01:00 |
dr. M.S. (Matthijs) Berends
|
2eca8c3f01
|
(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
|
2021-02-02 23:57:35 +01:00 |
dr. M.S. (Matthijs) Berends
|
20d638c193
|
(v1.5.0.9013) updated tibble printing colours
|
2021-01-28 16:09:30 +01:00 |
dr. M.S. (Matthijs) Berends
|
331c1f6508
|
(v1.5.0.9012) ampc_cephalosporin_resistance for I
|
2021-01-25 21:58:00 +01:00 |
dr. M.S. (Matthijs) Berends
|
24eb4453db
|
(v1.5.0.9011) small dosage update
|
2021-01-24 23:27:11 +01:00 |
dr. M.S. (Matthijs) Berends
|
286eaa9699
|
(v1.5.0.9010) MDRO vignette update, get_episode for < day
|
2021-01-24 14:48:56 +01:00 |
dr. M.S. (Matthijs) Berends
|
1a88caa119
|
(v1.5.0.9009) unit test fixes
|
2021-01-22 10:55:07 +01:00 |
dr. M.S. (Matthijs) Berends
|
1ba44776a1
|
(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
|
2021-01-22 10:20:41 +01:00 |
dr. M.S. (Matthijs) Berends
|
4eab095306
|
(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
dr. M.S. (Matthijs) Berends
|
e699de955c
|
(v1.5.0.9004) custom MDRO guideline
|
2021-01-17 00:26:48 +01:00 |
dr. M.S. (Matthijs) Berends
|
6745f3fb17
|
(v1.5.0.9002) doc update
|
2021-01-14 15:51:41 +01:00 |
dr. M.S. (Matthijs) Berends
|
bc00470dca
|
(v1.5.0.9001) more informative argument errors
|
2021-01-14 14:41:44 +01:00 |
dr. M.S. (Matthijs) Berends
|
d014955ce0
|
(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
|
2021-01-12 22:08:04 +01:00 |
dr. M.S. (Matthijs) Berends
|
3b84b8be75
|
v1.5.0
|
2021-01-06 11:16:17 +01:00 |
dr. M.S. (Matthijs) Berends
|
c9de74c81a
|
(v1.4.0.9059) ab class selector fix
|
2021-01-04 12:29:25 +01:00 |
dr. M.S. (Matthijs) Berends
|
d3f007bf65
|
(v1.4.0.9053) unit test old R versions
|
2020-12-29 21:23:01 +01:00 |
dr. M.S. (Matthijs) Berends
|
526f8afb08
|
(v1.4.0.9052) replaced all sapply's with type-safe vapply's
|
2020-12-28 22:24:33 +01:00 |
dr. M.S. (Matthijs) Berends
|
ccf13dd6c0
|
(v1.4.0.9051) ab class
|
2020-12-27 23:19:41 +01:00 |
dr. M.S. (Matthijs) Berends
|
afc325c314
|
(v1.4.0.9050) ab selectors base R
|
2020-12-27 20:32:40 +01:00 |
dr. M.S. (Matthijs) Berends
|
ed198916bf
|
(v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants
|
2020-12-27 14:23:11 +01:00 |
dr. M.S. (Matthijs) Berends
|
acbd0cf7ca
|
(v1.4.0.9046) get_episode
|
2020-12-27 00:07:00 +01:00 |
dr. M.S. (Matthijs) Berends
|
df37584189
|
(v1.4.0.9044) mo tibble printing, mo_shortname() fix
|
2020-12-24 23:29:10 +01:00 |
dr. M.S. (Matthijs) Berends
|
128ebcfd62
|
(v1.4.0.9043) documentation update
|
2020-12-22 00:51:17 +01:00 |
dr. M.S. (Matthijs) Berends
|
ee70883246
|
(v1.4.0.9042) auto dark theme website
|
2020-12-21 22:46:29 +01:00 |
dr. M.S. (Matthijs) Berends
|
81af41da3a
|
(v1.4.0.9041) updates based on review
|
2020-12-17 16:22:25 +01:00 |
dr. M.S. (Matthijs) Berends
|
1faa816090
|
(v1.4.0.9040) LA-MRSA / CA-MRSA
|
2020-12-16 16:18:53 +01:00 |
dr. M.S. (Matthijs) Berends
|
c8bcecf232
|
(v1.4.0.9037) random_* functions
|
2020-12-12 23:17:29 +01:00 |
dr. M.S. (Matthijs) Berends
|
c9fc7e8a45
|
(v1.4.0.9034) MIC printing update
|
2020-12-09 09:40:50 +01:00 |
dr. M.S. (Matthijs) Berends
|
2145f1d1ba
|
(v1.4.0.9033) documentation update
|
2020-12-08 12:37:25 +01:00 |
dr. M.S. (Matthijs) Berends
|
1bdb136b3a
|
(v1.4.0.9032) auto-data guessing for functions
|
2020-12-07 16:06:42 +01:00 |
dr. M.S. (Matthijs) Berends
|
e03b3c96d3
|
(v1.4.0.9030) as.mo() fix for known lab codes
|
2020-12-03 16:59:04 +01:00 |
dr. M.S. (Matthijs) Berends
|
4c114ff4b4
|
(v1.4.0.9029) grey background for backticks, like readr pkg
|
2020-12-01 16:59:57 +01:00 |
dr. M.S. (Matthijs) Berends
|
7b42b15c90
|
(v1.4.0.9026) docu update
|
2020-11-24 11:47:54 +01:00 |
dr. M.S. (Matthijs) Berends
|
b045b571a6
|
(v1.4.0.9025) is_new_episode()
|
2020-11-23 21:50:27 +01:00 |
dr. M.S. (Matthijs) Berends
|
363218da7e
|
(v1.4.0.9024) is_new_episode()
|
2020-11-17 16:57:41 +01:00 |
dr. M.S. (Matthijs) Berends
|
deefce9520
|
(v1.4.0.9021) more robust class setting
|
2020-11-16 16:57:55 +01:00 |
dr. M.S. (Matthijs) Berends
|
05fb213a7c
|
(v1.4.0.9020) mo_is_intrinsic_resistant
|
2020-11-16 11:03:24 +01:00 |
dr. M.S. (Matthijs) Berends
|
9666b78ea7
|
(v1.4.0.9019) documentation update
|
2020-11-12 11:07:23 +01:00 |
dr. M.S. (Matthijs) Berends
|
f2edac3b67
|
(v1.4.0.9018) reference_data in as.rsi()
|
2020-11-11 18:54:03 +01:00 |
dr. M.S. (Matthijs) Berends
|
01d9522434
|
(v1.4.0.9017) stringsAsFactors definitions
|
2020-11-11 16:49:27 +01:00 |
dr. M.S. (Matthijs) Berends
|
dd5a0319ef
|
(v1.4.0.9014) bugfix
|
2020-11-09 15:18:36 +01:00 |
dr. M.S. (Matthijs) Berends
|
d3b1d33210
|
(v1.4.0.9013) is_gram_negative/positive update
|
2020-11-09 13:07:02 +01:00 |
dr. M.S. (Matthijs) Berends
|
423879c034
|
(v1.4.0.9012) reference_df fix
|
2020-11-05 01:11:49 +01:00 |
dr. M.S. (Matthijs) Berends
|
760d69a3e0
|
(v1.4.0.9008) like variations
|
2020-10-26 12:23:03 +01:00 |
dr. M.S. (Matthijs) Berends
|
9109b9dd62
|
(v1.4.0.9005) bugfix
|
2020-10-21 13:07:23 +02:00 |
dr. M.S. (Matthijs) Berends
|
ade9f8bafd
|
(v1.4.0.9004) bugfix
|
2020-10-21 11:50:43 +02:00 |
dr. M.S. (Matthijs) Berends
|
2ef7dfc8a3
|
(v1.4.0.9003) CoNS update
|
2020-10-20 21:00:57 +02:00 |
dr. M.S. (Matthijs) Berends
|
4e9ccb4435
|
(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
|
2020-10-19 17:09:19 +02:00 |
dr. M.S. (Matthijs) Berends
|
28e77680c5
|
(v1.4.0) matching score update
|
2020-10-08 11:16:03 +02:00 |
dr. M.S. (Matthijs) Berends
|
c04dc852cf
|
(v1.3.0.9039) lifecycle updates, added excess kurtosis
|
2020-10-04 21:02:16 +02:00 |
dr. M.S. (Matthijs) Berends
|
baf510183c
|
(v1.3.0.9038) prefinal 1.4.0
|
2020-10-04 19:26:43 +02:00 |
dr. M.S. (Matthijs) Berends
|
ac1c78c793
|
(v1.3.0.9036) documentation fix
|
2020-09-30 10:24:53 +02:00 |
dr. M.S. (Matthijs) Berends
|
4e0374af29
|
(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
|
2020-09-29 23:35:46 +02:00 |
dr. M.S. (Matthijs) Berends
|
36ec8b0d81
|
(v1.3.0.9033) skimr fix
|
2020-09-28 11:00:59 +02:00 |
dr. M.S. (Matthijs) Berends
|
22f6ceb3e4
|
(v1.3.0.9031) matching score update
|
2020-09-26 16:51:17 +02:00 |
dr. M.S. (Matthijs) Berends
|
050a9a04fb
|
(v1.3.0.9030) matching score update
|
2020-09-26 16:26:01 +02:00 |
dr. M.S. (Matthijs) Berends
|
9667c2994f
|
(v1.3.0.9029) eucast rules fix, unique()
|
2020-09-25 14:44:50 +02:00 |
dr. M.S. (Matthijs) Berends
|
1d982a82b4
|
(v1.3.0.9028) eucast fix
|
2020-09-24 12:38:13 +02:00 |
dr. M.S. (Matthijs) Berends
|
c19095a3d5
|
(v1.3.0.9026) eucast expert rules 3.2
|
2020-09-24 00:30:11 +02:00 |
dr. M.S. (Matthijs) Berends
|
d049cce69b
|
(v1.3.0.9023) optimalisation
|
2020-09-19 11:54:01 +02:00 |
dr. M.S. (Matthijs) Berends
|
4e40e42011
|
(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
|
2020-09-18 16:05:53 +02:00 |
dr. M.S. (Matthijs) Berends
|
ab60f613aa
|
(v1.3.0.9020) fix for uncertainty in as.mo()
|
2020-09-14 19:41:48 +02:00 |