dr. M.S. (Matthijs) Berends
1b499bf012
fixes
2023-07-10 17:02:28 +02:00
dr. M.S. (Matthijs) Berends
a4e2e25e3f
reftbl in plots, speedup for as.sir() and mo_validate
2023-07-10 16:43:46 +02:00
dr. M.S. (Matthijs) Berends
70c601ca11
breakpoints UTI interpretation fix
2023-07-10 13:41:52 +02:00
dr. M.S. (Matthijs) Berends
3829311dd3
random() fix
2023-07-08 21:00:49 +02:00
dr. M.S. (Matthijs) Berends
acb534102b
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
dr. M.S. (Matthijs) Berends
2d97cca6d9
fix reference_df endless loop
2023-06-26 13:52:02 +02:00
dr. M.S. (Matthijs) Berends
1d9ee39cc7
fix for mo codes
2023-06-22 15:24:18 +02:00
Dr. Matthijs Berends
f065945d7b
Update clinical breakpoints and fix some as.mo() bugs ( #117 )
...
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102 , fixes #112 , fixes #113 , fixes #114 , fixes #115
* docs
* implement ecoffs
* unit tests
2023-06-22 15:10:59 +02:00
dr. M.S. (Matthijs) Berends
9591688811
documentation update
2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends
e1966503ee
unit testing R4.3
2023-05-26 20:37:00 +02:00
dr. M.S. (Matthijs) Berends
766db4e21f
as.mo fix
2023-05-26 19:20:21 +02:00
dr. M.S. (Matthijs) Berends
c6135d2082
updated microorganism codes
2023-05-26 16:10:01 +02:00
dr. M.S. (Matthijs) Berends
0bcf55d3b6
improve as.mo()
2023-05-24 15:55:53 +02:00
dr. M.S. (Matthijs) Berends
3018fb87a9
icu_exclude in first_isolate(), fixes #110
2023-05-17 22:12:10 +02:00
Dr. Matthijs Berends
5f9769a4f7
Add oxygen tolerance
2023-05-12 10:37:07 +02:00
dr. M.S. (Matthijs) Berends
8179092c57
add XPT files for SAS software
2023-05-12 10:07:55 +02:00
dr. M.S. (Matthijs) Berends
91fa73dedf
add oxygen tolerance
2023-05-11 21:56:27 +02:00
dr. M.S. (Matthijs) Berends
bf08d136a0
fix coercing NA to custom codes, fixes #107
2023-05-08 13:04:18 +02:00
dr. M.S. (Matthijs) Berends
9de19fdc49
documentation
2023-04-21 10:07:25 +02:00
dr. M.S. (Matthijs) Berends
9148a2dcf4
fix mo_rank() for 'unknown' MOs
2023-04-20 15:20:41 +02:00
dr. M.S. (Matthijs) Berends
2758615cd0
version fix
2023-04-19 00:34:41 +02:00
dr. M.S. (Matthijs) Berends
02322ac2ee
Fix PK/PD breakpoints
2023-04-19 00:31:31 +02:00
dr. M.S. (Matthijs) Berends
cabffb22fd
anaerobic codes
2023-04-17 11:26:19 +02:00
dr. M.S. (Matthijs) Berends
ad3061c754
unit test
2023-04-15 10:32:37 +02:00
dr. M.S. (Matthijs) Berends
1a02d302d4
Fix translatable strings
2023-04-15 09:32:13 +02:00
dr. M.S. (Matthijs) Berends
ed70f95380
Fix clinical breakpoints
2023-04-14 23:14:34 +02:00
dr. M.S. (Matthijs) Berends
147f9112e9
Fix some WHONET codes
2023-04-14 11:12:26 +02:00
dr. M.S. (Matthijs) Berends
549790c2a6
website
2023-03-20 21:59:50 +01:00
dr. M.S. (Matthijs) Berends
c28cfa3a77
fix documentation
2023-03-16 08:55:37 +01:00
dr. M.S. (Matthijs) Berends
dd7cc86485
help page %like%
2023-03-14 19:49:50 +01:00
dr. M.S. (Matthijs) Berends
68aa98f294
website
2023-03-12 15:59:25 +01:00
dr. M.S. (Matthijs) Berends
dee675e717
Version 2.0 on CRAN
2023-03-12 14:07:45 +01:00
dr. M.S. (Matthijs) Berends
80cfc503c2
check for 2.0
2023-03-12 13:02:37 +01:00
dr. M.S. (Matthijs) Berends
9179e98e12
patient ID in first isolate
2023-03-11 17:13:19 +01:00
dr. M.S. (Matthijs) Berends
7ad8635994
documentation for 'data.table' AB selectors
2023-03-11 16:54:02 +01:00
dr. M.S. (Matthijs) Berends
45e840c02f
update NEWS
2023-03-11 14:43:31 +01:00
dr. M.S. (Matthijs) Berends
262598b8d7
support for old rsi arguments
2023-03-11 14:24:34 +01:00
dr. M.S. (Matthijs) Berends
4416394e10
website update
2023-02-26 21:26:58 +01:00
dr. M.S. (Matthijs) Berends
1d3d7d40bc
get episode unit tests
2023-02-24 19:54:56 +01:00
dr. M.S. (Matthijs) Berends
2c5a9bb622
new relative episode determination in get_episode(), fix for plotting disk/MIC values
2023-02-24 17:06:30 +01:00
dr. M.S. (Matthijs) Berends
92029c9e95
remove note
2023-02-24 10:31:36 +01:00
dr. M.S. (Matthijs) Berends
049baf0a71
fix for antibiograms on R < 3.5
2023-02-24 09:43:10 +01:00
dr. M.S. (Matthijs) Berends
e70f2cd32c
knitr format
2023-02-23 16:27:40 +01:00
dr. M.S. (Matthijs) Berends
a84101db08
N for only 1 AB in
2023-02-22 16:26:13 +01:00
dr. M.S. (Matthijs) Berends
551aaf6517
auto-remove missing ABs in antibiogram()
2023-02-22 16:00:52 +01:00
dr. M.S. (Matthijs) Berends
c2cfc5ef84
fix for antibiogram(), transform WHONET data set to sir
2023-02-22 15:40:05 +01:00
dr. M.S. (Matthijs) Berends
dad25302f2
make rsi work in more cases, documentation update
2023-02-22 14:38:57 +01:00
dr. M.S. (Matthijs) Berends
380cbec0e8
prehook
2023-02-18 14:58:02 +01:00
dr. M.S. (Matthijs) Berends
8d902410f9
unit tests
2023-02-18 14:56:06 +01:00
dr. M.S. (Matthijs) Berends
8dcf101a9c
website
2023-02-18 13:08:08 +01:00
