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22f6ceb3e4
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(v1.3.0.9031) matching score update
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2020-09-26 16:51:17 +02:00 |
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050a9a04fb
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(v1.3.0.9030) matching score update
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2020-09-26 16:26:01 +02:00 |
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9667c2994f
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(v1.3.0.9029) eucast rules fix, unique()
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2020-09-25 14:44:50 +02:00 |
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1d982a82b4
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(v1.3.0.9028) eucast fix
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2020-09-24 12:38:13 +02:00 |
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c19095a3d5
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(v1.3.0.9026) eucast expert rules 3.2
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2020-09-24 00:30:11 +02:00 |
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d049cce69b
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(v1.3.0.9023) optimalisation
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2020-09-19 11:54:01 +02:00 |
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4e40e42011
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(v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix
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2020-09-18 16:05:53 +02:00 |
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ab60f613aa
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(v1.3.0.9020) fix for uncertainty in as.mo()
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2020-09-14 19:41:48 +02:00 |
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354c606d6a
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(v1.3.0.9019) small fix
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2020-09-14 14:08:07 +02:00 |
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7b6dd676f7
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(v1.3.0.9018) language corrections
|
2020-09-14 12:21:23 +02:00 |
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3ff871afeb
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(v1.3.0.9016) mo_uncertainties() overhaul
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2020-09-12 08:49:01 +02:00 |
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c4b87fe241
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(v1.3.0.9014) as.mo() speed improvement
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2020-09-03 12:31:48 +02:00 |
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81af0b001c
|
(v1.3.0.9009) documentation update
|
2020-08-26 16:13:40 +02:00 |
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9b8db57c65
|
(v1.3.0.9008) also tibble printing for ab
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2020-08-26 15:34:12 +02:00 |
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5e45fdcf2a
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(v1.3.0.9007) tibble printing
|
2020-08-26 11:33:54 +02:00 |
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c8c8bb4e3a
|
(v1.3.0.9006) website update
|
2020-08-21 11:40:13 +02:00 |
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dab017a50f
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(v1.3.0.9004) data sets, as.disk() improvement
|
2020-08-16 21:38:42 +02:00 |
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e73f0e211c
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(v1.3.0.9003) as.rsi() speed improvement
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2020-08-15 12:54:47 +02:00 |
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08d62bb5d5
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(v1.3.0.9002) intrinsic_resistant data set
|
2020-08-14 13:36:10 +02:00 |
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7d16bec21f
|
(v1.3.0.9001) website update
|
2020-08-10 12:46:03 +02:00 |
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0d9602a6a9
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(v1.3.0.9000) support across() in as.rsi()
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2020-08-10 11:44:58 +02:00 |
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c5f7294381
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(v1.3.0) skip more CRAN tests
|
2020-07-31 10:50:08 +02:00 |
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c8edcb7439
|
(v1.3.0) small fixes
|
2020-07-30 15:15:52 +02:00 |
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ea4e5e5b81
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(v1.3.0) v1.3.0
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2020-07-29 13:48:50 +02:00 |
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de0f7b8950
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(v1.2.0.9040) conserve_capped_values for as.rsi()
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2020-07-29 12:47:58 +02:00 |
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e7def0aa4c
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(v1.2.0.9039) conserve_capped_values for as.rsi()
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2020-07-29 11:46:59 +02:00 |
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453f7f210b
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(v1.2.0.9038) CLSI 2019 fix
|
2020-07-29 10:33:47 +02:00 |
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1b65d76cfb
|
(v1.2.0.9037) survey on website
|
2020-07-28 18:39:57 +02:00 |
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09fba38ea6
|
(v1.2.0.9035) as.mo() speed improvement
|
2020-07-22 10:24:23 +02:00 |
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c0cf7ab02b
|
(v1.2.0.9033) speed improvement mdro(), filter_ab_class()
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2020-07-12 11:43:31 +02:00 |
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76fc8e1b14
|
(v1.2.0.9026) move to github
|
2020-07-08 14:48:06 +02:00 |
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152ac5bcad
|
(v1.2.0.9023) ab_from_text() improvement
|
2020-07-02 21:12:52 +02:00 |
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298e67a45b
|
(v1.2.0.9022) as.ab() improvement
|
2020-07-01 16:21:36 +02:00 |
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329a0eb0b6
|
(v1.2.0.9019) ab_from_text() dose and administration
|
2020-07-01 11:07:01 +02:00 |
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4f6f056077
|
(v1.2.0.9017) ab_from_text() improvement
|
2020-06-26 12:31:27 +02:00 |
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344bbd57f4
|
(v1.2.0.9014) ab_from_text()
|
2020-06-25 17:34:50 +02:00 |
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8a66e475d7
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(v1.2.0.9013) unit test fix
|
2020-06-22 13:18:40 +02:00 |
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93a158aebd
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(v1.2.0.9011) mo_domain(), improved error handling
|
2020-06-22 11:18:40 +02:00 |
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e88d7853f5
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(v1.2.0.9010) documentation fix
|
2020-06-17 21:35:10 +02:00 |
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ac12392da3
|
(v1.2.0.9008) ab_class improvement
|
2020-06-17 15:14:37 +02:00 |
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c4d7412f36
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(v1.2.0.9007) Tidyverse selections
|
2020-06-17 01:39:30 +02:00 |
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8b692ecfcf
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(v1.2.0.9004) rsi_df() fix for groups
|
2020-06-09 16:18:03 +02:00 |
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5dc4c96b7d
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(v1.2.0.9001) filter_ab_class() update
|
2020-06-03 11:48:00 +02:00 |
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d9a4b0bcaf
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(v1.1.0.9021) 1st isolates update
|
2020-05-28 10:51:56 +02:00 |
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86d44054f0
|
(v1.1.0.9020) updated taxonomy
|
2020-05-27 16:37:49 +02:00 |
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ae1969b941
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(v1.1.0.9019) mo_source fix
|
2020-05-25 01:01:14 +02:00 |
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f5ff2e6634
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(v1.1.0.9018) as.ab() update, added ab_url()
|
2020-05-22 20:29:55 +02:00 |
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e467cc103e
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(v1.1.0.9017) as.ab() update, added ab_url()
|
2020-05-22 20:15:19 +02:00 |
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743f9a5364
|
(v1.1.0.9015) new default eucast_rules
|
2020-05-20 12:00:17 +02:00 |
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5216d2b520
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(v1.1.0.9014) lose dependencies
|
2020-05-19 14:16:45 +02:00 |
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19703eb5d3
|
(v1.1.0.9012) lose dependencies
|
2020-05-19 12:08:49 +02:00 |
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bf0402a653
|
(v1.1.0.9009) lose dependencies
|
2020-05-18 10:30:53 +02:00 |
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f68d71a5e0
|
(v1.1.0.9007) lose dependencies
|
2020-05-16 21:40:50 +02:00 |
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df2456b91f
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(v1.1.0.9005) lose dependencies
|
2020-05-16 20:08:21 +02:00 |
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7f3da74b17
|
(v1.1.0.9004) lose dependencies
|
2020-05-16 13:05:47 +02:00 |
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5bdece1f9d
|
(v1.1.0.9000) CI fix
|
2020-04-30 09:05:03 +02:00 |
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b040185269
|
(v1.1.0.9000) CLSI as.rsi() fix, better vctrs support, new CI
|
2020-04-29 14:33:44 +02:00 |
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c2ffbd9f95
|
(v1.0.1.9009) prepare for next release
|
2020-04-15 11:30:28 +02:00 |
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4be54d608c
|
(v1.0.1.9008) RIVM abbreviations for drugs
|
2020-04-14 20:38:09 +02:00 |
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7a6f819232
|
(v1.0.1.9006) added generic CLSI rules
|
2020-04-14 14:12:31 +02:00 |
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d1cb7d3b6f
|
(v1.0.1.9005) as.mo() improvements
|
2020-04-13 21:09:56 +02:00 |
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219cff403f
|
(v1.0.1.9004) Support dplyr 1.0.0
|
2020-03-14 14:05:43 +01:00 |
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77656a676c
|
(v1.0.1.9002) PCA unit tests
|
2020-03-08 11:18:59 +01:00 |
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9fc858f208
|
(v1.0.1.9001) PCA unit tests
|
2020-03-08 09:12:11 +01:00 |
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fa0d9c58d9
|
(v1.0.1.9000) first PCA implementation
|
2020-03-07 21:48:21 +01:00 |
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0d5e78b2cf
|
(v1.0.0.9007) small doc fix
|
2020-02-22 17:03:47 +01:00 |
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ea32e9916a
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(v1.0.0.9005) info printing only in interactive mode
|
2020-02-21 21:13:38 +01:00 |
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47fe8b7820
|
(v1.0.0.9004) add example_isolaten_unclean
|
2020-02-21 16:05:19 +01:00 |
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bb3728f023
|
(v1.0.0.9003) prepare for short update
|
2020-02-21 13:13:34 +01:00 |
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bdb26f624f
|
(v1.0.0.9001) add uti to as.rsi()
|
2020-02-20 17:21:01 +01:00 |
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c6184a0fb8
|
(v0.9.0.9029) add uti to as.rsi()
|
2020-02-20 13:19:23 +01:00 |
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c8981a563e
|
(v0.9.0.9027) documentation fix
|
2020-02-17 15:07:25 +01:00 |
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5e2b294351
|
(v0.9.0.9026) update documentation
|
2020-02-17 14:38:01 +01:00 |
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11f00f8a0a
|
(v0.9.0.9025) update as.rsi documentation
|
2020-02-16 22:43:56 +01:00 |
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c7a93af3d0
|
(v0.9.0.9024) global vars fix
|
2020-02-14 20:03:43 +01:00 |
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9b8b02960e
|
(v0.9.0.9023) EUCAST 2020 guidelines
|
2020-02-14 19:54:13 +01:00 |
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c7a76ba713
|
(v0.9.0.9020) as.mo() improvement
|
2020-02-09 22:04:29 +01:00 |
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4e1c16c5a5
|
(v0.9.0.9019) website update
|
2020-02-01 15:09:36 +01:00 |
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f152ab9a48
|
(v0.9.0.9018) Remove mo_history
|
2020-01-31 23:27:38 +01:00 |
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1b80773c22
|
(v0.9.0.9017) documentation fix
|
2020-01-27 19:30:26 +01:00 |
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a13c62e6e8
|
(v0.9.0.9016) Support SNOMED codes
|
2020-01-27 19:14:23 +01:00 |
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9a3891efe4
|
(v0.9.0.9014) Machine reading guidelines
|
2020-01-27 11:05:39 +01:00 |
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423d1d3c41
|
(v0.9.0.9013) Support for LOINC codes
|
2020-01-26 20:38:54 +01:00 |
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449d9bde35
|
(v0.9.0.9012) Support for LOINC codes
|
2020-01-26 20:20:00 +01:00 |
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64f5ceef03
|
(v0.9.0.9009) antibiotics data set update
|
2020-01-08 11:30:33 +01:00 |
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ced1a7b7fa
|
(v0.9.0.9008) Happy new year! Add lifecycles
|
2020-01-05 17:22:09 +01:00 |
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ba3ce77f02
|
(v0.9.0.9005) as.mo for G. species
|
2019-12-21 10:56:06 +01:00 |
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56ce9bf665
|
(v0.9.0) website fixes
|
2019-11-30 12:01:50 +01:00 |
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bb2ed55842
|
(v0.9.0) v0.9.0
|
2019-11-29 19:43:23 +01:00 |
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9feef53bde
|
(v0.8.0.9037) complete documentation rewrite
|
2019-11-28 23:00:37 +01:00 |
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c5f00f4a9f
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(v0.8.0.9036) complete documentation rewrite
|
2019-11-28 22:32:17 +01:00 |
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7c28b392b1
|
(v0.8.0.9035) add more mo codes
|
2019-11-24 22:48:56 +01:00 |
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e53cc4990c
|
(v0.8.0.9034) add cid to antivirals
|
2019-11-23 12:39:57 +01:00 |
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267320f15f
|
(v0.8.0.9033) antivirals data set, cleanup
|
2019-11-18 12:10:47 +01:00 |
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09e2730b53
|
(v0.8.0.9031) as.mo() improvements
|
2019-11-15 15:25:03 +01:00 |
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248b45da71
|
(v0.8.0.9030) depend on tidyr >= 1.0.0
|
2019-11-11 10:46:39 +01:00 |
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d22834c5b8
|
(v0.8.0.9029) cleanup
|
2019-11-10 15:50:18 +01:00 |
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54b6322056
|
(v0.8.0.9028) examples fix
|
2019-11-10 13:17:20 +01:00 |
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59ededa8dc
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(v0.8.0.9027) adding susceptibility() and resistance()
|
2019-11-10 12:16:56 +01:00 |
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e2d05cb1b0
|
(v0.8.0.9017) keywords update
|
2019-11-06 14:43:23 +01:00 |
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2560aa1a53
|
(v0.8.0.9013) unit test update
|
2019-11-05 21:52:58 +01:00 |
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0bb531f3e0
|
(v0.8.0.9009) unit test
|
2019-11-03 22:41:29 +01:00 |
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29e448883d
|
(v0.8.0.9008) new verbose mode for MDROs
|
2019-11-03 22:24:42 +01:00 |
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09c4b04cd0
|
(v0.8.0.9007) Enterobacterales order
|
2019-10-30 23:02:50 +01:00 |
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7ff2ad8188
|
(v0.8.0.9006) small typos
|
2019-10-27 00:31:59 +02:00 |
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d2e8249edd
|
(v0.8.0.9004) added MDR guideline by Magiorakos et al.
|
2019-10-26 21:56:41 +02:00 |
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00cdb498a0
|
(v0.7.1.9102) lintr
|
2019-10-11 17:21:02 +02:00 |
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c8f6b97847
|
(v0.7.1.9100) bug_drug speed, MIC levels
|
2019-10-08 22:21:33 +02:00 |
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f479dfce60
|
(v0.7.1.9097) mdro() examples fix
|
2019-10-07 14:57:27 +02:00 |
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4e9c4c1b4e
|
(v0.7.1.9096) German guideline for mdro()
|
2019-10-07 14:32:06 +02:00 |
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8bc4081b03
|
(v0.7.1.9092) as.ab() improvements
|
2019-10-04 15:36:12 +02:00 |
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edb599ae0b
|
(v0.7.1.9091) percentage from clean pkg
|
2019-09-30 16:45:36 +02:00 |
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99d0fe76dd
|
(v0.7.1.9088) bug_drug improvement
|
2019-09-25 15:43:22 +02:00 |
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a8c6b8f9c4
|
(v0.7.1.9082) CI fix
|
2019-09-23 14:37:24 +02:00 |
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64d9829030
|
(v0.7.1.9081) bug_drug fixes
|
2019-09-23 13:53:50 +02:00 |
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66d405ff57
|
(v0.7.1.9080) new LIS codes
|
2019-09-22 17:19:59 +02:00 |
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40e6b3e8f6
|
(v0.7.1.9077) mo codes fix
|
2019-09-20 14:18:29 +02:00 |
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3596adb295
|
(v0.7.1.9076) mo codes
|
2019-09-20 12:33:05 +02:00 |
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e2aa4f996b
|
(v0.7.1.9075) new microorganism codes
|
2019-09-18 15:46:09 +02:00 |
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398c5bdc4f
|
(v0.7.1.9073) as.mo() self-learning algorithm
|
2019-09-15 22:57:30 +02:00 |
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cd178ee569
|
(v0.7.1.9072) key_antibiotics() for foreign systems
|
2019-09-12 15:08:53 +02:00 |
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b5d2a08401
|
(v0.7.1.9071) p_symbol()
|
2019-09-03 09:47:39 +02:00 |
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06b6266366
|
(v0.7.1.9070) na.rm for age(), age_groups()
|
2019-09-02 15:17:41 +02:00 |
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e2b78fa428
|
(v0.7.1.9066) bug-drug fix
|
2019-08-27 23:00:00 +02:00 |
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248638ad91
|
(v0.7.1.9065) bug-drug fix
|
2019-08-27 22:41:09 +02:00 |
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f3276592b7
|
(v0.7.1.9064) bug-drug fix
|
2019-08-27 19:15:04 +02:00 |
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93be16484b
|
(v0.7.1.9063) septic_patients -> example_isolates
|
2019-08-27 16:45:42 +02:00 |
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7a6fce4eb8
|
(v0.7.1.9062) mo/ab assignment improvements
|
2019-08-26 16:02:03 +02:00 |
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e46cb0399f
|
(v0.7.1.9059) bug_drug_combinations
|
2019-08-25 22:53:22 +02:00 |
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920212e815
|
(v0.7.1.9056) mo and ab subsetting
|
2019-08-14 14:57:06 +02:00 |
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7108454ba5
|
(v0.7.1.9055) algorithm improvements
|
2019-08-13 16:15:08 +02:00 |
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bd252a2984
|
(v0.7.1.9036) preserve ab/mo classes in subsetting
|
2019-08-12 14:48:09 +02:00 |
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1d423cca89
|
(v0.7.1.9035) cephalosporins and unit tests
|
2019-08-11 19:07:26 +02:00 |
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3f5828e74a
|
(v0.7.1.9034) mo.codes fix for Dracunculus spp.
|
2019-08-09 23:45:26 +02:00 |
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6598c5615d
|
(v0.7.1.9033) 5000 new fungi
|
2019-08-09 23:22:10 +02:00 |
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6a349bf757
|
(v0.7.1.9032) eucast_rules() improvements
|
2019-08-09 14:28:46 +02:00 |
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1ce4b72dd2
|
(v0.7.1.9031) include_unknown for first_isolate()
|
2019-08-08 22:39:42 +02:00 |
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bfa92eb166
|
(v0.7.1.9028) predict update
|
2019-08-07 15:58:32 +02:00 |
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90c874025a
|
(v0.7.1.9027) tibble printing
|
2019-08-07 15:37:39 +02:00 |
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3a1f960f89
|
(v0.7.1.9024) eucast_rules() fix, new MOs
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2019-08-06 14:39:22 +02:00 |
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d6ab3896a1
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(v0.7.1.9021) CI fix for resistance_predict
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2019-08-04 10:48:41 +02:00 |
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2a62c3d62a
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(v0.7.1.9018) deps
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2019-07-30 13:12:40 +02:00 |
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ec0ca20dee
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(v0.7.1.9017) deps
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2019-07-29 21:20:26 +02:00 |
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b7e2d7b9b8
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(v0.7.1.9016) deps
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2019-07-29 17:34:57 +02:00 |
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240f03a672
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(v0.7.1.9015) Remove freq()
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2019-07-29 13:33:48 +02:00 |
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b452de2fe4
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(v0.7.1.9010) eucast informative text in verbose mode
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2019-07-09 13:36:03 +02:00 |
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b15d59cf03
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(v0.7.1.9009) note for WHOCC
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2019-07-09 11:22:46 +02:00 |
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c57ad26c5b
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(v0.7.1.9007) mdro update
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2019-07-04 15:26:07 +02:00 |
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4ff20af123
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(v0.7.1.9006) new rsi calculations, atc class removal
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2019-07-02 16:48:52 +02:00 |
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156d550895
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(v0.7.1.9005) new rsi calculations, atc class removal
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2019-07-01 14:03:15 +02:00 |
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65c6702b21
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(v0.7.1.9004) atc class removal
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2019-06-27 11:57:45 +02:00 |
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c9156c004a
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(v0.7.0.9013) mo_synonym fix
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2019-06-22 14:49:12 +02:00 |
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9c39c35f86
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(v0.7.0.9010) mo_synonyms, plot/barplot fixes
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2019-06-16 21:42:40 +02:00 |
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254745061c
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(v0.7.0.9008) T. vaginalis, rsi_df
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2019-06-13 14:28:46 +02:00 |
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8f674e19bb
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(v0.7.0.9005) ab algorithm update
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2019-06-11 14:18:25 +02:00 |
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ec48f1d83b
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(v0.7.0.9003) scale fix
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2019-06-08 23:50:06 +02:00 |
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270aa0dd33
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v0.7.0
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2019-06-03 17:45:22 +02:00 |
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702da574c0
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website update
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2019-06-02 19:50:22 +02:00 |
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bd73988f15
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(v0.6.1.9053) prerelease fixes
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2019-06-02 19:23:19 +02:00 |
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2667fff8a7
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(v0.6.1.9050) support staged install
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2019-06-01 20:40:49 +02:00 |
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a665612cb8
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(v0.6.1.9049) data creation fix
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2019-05-31 21:20:16 +02:00 |
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4ed27c7e7a
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(v0.6.1.9046) ggplot fix
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2019-05-31 20:25:57 +02:00 |
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f03f71eced
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(v0.6.1.9045) age test fix
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2019-05-31 14:40:15 +02:00 |
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493ae2ba0c
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(v0.6.1.9044) first_isolate fix for species
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2019-05-31 14:25:11 +02:00 |
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1f8ee3ec3e
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(v0.6.1.9043) age doc fix
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2019-05-30 08:51:38 +02:00 |
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8b5e2b030b
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added boxplot for (grouped) freq()
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2019-05-29 19:56:17 +02:00 |
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62e6f41961
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website update
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2019-05-29 00:36:48 +02:00 |
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7e0e171512
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website update
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2019-05-23 19:39:07 +02:00 |
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bbf8b611e3
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doc fix
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2019-05-23 17:35:58 +02:00 |
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60983a1640
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added mdr_tb()
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2019-05-23 16:58:59 +02:00 |
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4ca00e1868
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speed improvement eucast_rules(), support more old MO codes
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2019-05-20 12:00:18 +02:00 |
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b0033dae1b
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website update
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2019-05-17 20:22:04 +02:00 |
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5eda991c47
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ab_info fix
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2019-05-16 22:07:31 +02:00 |
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4c3cf85a65
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ab_info, other bug fixes
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2019-05-16 21:20:00 +02:00 |
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f6bf54b37d
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documentation fix
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2019-05-13 20:16:51 +02:00 |
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2ea0c93e44
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documentation fix
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2019-05-13 16:35:48 +02:00 |
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cc403169c6
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first isolate missing dates fix
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2019-05-13 14:56:23 +02:00 |
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0dc0715dc6
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CI tests
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2019-05-13 12:21:57 +02:00 |
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38a4421450
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CI tests
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2019-05-13 10:10:16 +02:00 |
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fcc77164e9
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mdro fix
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2019-05-11 23:30:10 +02:00 |
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68cc7ef0d0
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new antibiotics
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2019-05-10 16:44:59 +02:00 |
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461eec9bac
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cfta streptococci, codecov.yml
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2019-04-09 14:59:17 +02:00 |
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cffb7787d8
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cfta streptococci
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2019-04-09 10:34:40 +02:00 |
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30b559827c
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documentation update
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2019-04-07 22:40:02 +02:00 |
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51fdc5d6cc
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self-learning off
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2019-04-06 09:38:23 +02:00 |
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fbc9191b13
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new EUCAST rules algorithm
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2019-04-05 18:47:39 +02:00 |
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b25f2d6213
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v0.6.1
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2019-03-28 21:33:28 +01:00 |
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8a1d384d9c
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ci fixes
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2019-03-26 15:34:04 +01:00 |
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29f444543d
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added Becker 2019
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2019-03-26 14:24:03 +01:00 |
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c6a12266e7
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DSMZ data
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2019-03-18 14:29:41 +01:00 |
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e18a1f1f17
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as.mo improvement
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2019-03-15 17:36:42 +01:00 |
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fdffc2791b
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memory for as.mo()
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2019-03-15 13:57:25 +01:00 |
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504a042fba
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uncertainty levels, new WHONET codes
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2019-03-12 12:19:27 +01:00 |
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b319b89750
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WHONET fix
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2019-03-09 08:21:00 +01:00 |
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0c0c6e289b
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small as.mo fix
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2019-03-06 14:39:02 +01:00 |
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5c7a061a5d
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filter_ab_class fix
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2019-03-06 09:32:48 +01:00 |
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74e0ae21fd
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con WHONET, filter ab class
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2019-03-05 22:47:42 +01:00 |
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e835525cf6
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unknown codes, rsi fix
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2019-03-02 22:47:04 +01:00 |
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c5efb272fd
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mo_source improvement
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2019-03-01 09:34:04 +01:00 |
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2565b60024
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rlang dependency, new fungi
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2019-02-28 13:56:28 +01:00 |
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