 dr. M.S. (Matthijs) Berends
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a44283f998
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(v1.7.1.9024) unit tests
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2021-08-17 14:34:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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a2d249962f
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(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
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2021-08-16 21:54:34 +02:00 |
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dr. M.S. (Matthijs) Berends
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4e1efd902c
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(v1.7.1.9022) rely on vctrs for ab selectors
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2021-07-23 21:42:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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0ec81cc12e
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(v1.7.1.9021) autoplot generics
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2021-07-12 22:12:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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6838f03bde
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(v1.7.1.9020) autoplot generics
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2021-07-12 20:24:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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fc946564d1
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(v1.7.1.9019) Morganella MIC in EUCAST 2021
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2021-07-12 12:28:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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b228eb1536
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(v1.7.1.9016) only_treatable ab selectors
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2021-07-08 22:23:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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625a6fb304
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(v1.7.1.9015) removed S3 taxonomic_name again
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2021-07-07 20:34:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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ad10693a1a
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(v1.7.1.9014) rep() for S3 classes
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2021-07-06 16:35:14 +02:00 |
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dr. M.S. (Matthijs) Berends
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16b4c74d44
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(v1.7.1.9013) temp fix for ggplot2 bug #4511
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2021-07-04 22:10:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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5b5741f681
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(v1.7.1.9011) subsetting taxonomy fix
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2021-07-04 15:26:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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95050ee3e0
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(v1.7.1.9007) Updated antibiotics dataset, fixes #41
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2021-06-23 10:03:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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d04e83f494
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(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
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2021-06-22 12:16:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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99be4c7e7e
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(v1.7.1.9002) ab class selectors update
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2021-06-14 22:04:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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683a0e748a
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(v1.7.1.9001) unit tests
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2021-06-05 15:12:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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1908e7cc7a
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(v1.7.1.9000) ab_class update, unit tests
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2021-06-04 21:07:55 +02:00 |
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dr. M.S. (Matthijs) Berends
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7e70403efb
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(v1.7.1) New CRAN release
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2021-06-03 15:19:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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bef0f42f66
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(v1.7.0.9001) CLSI 2020 guideline
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2021-06-01 15:33:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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a12572c752
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doc update
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2021-05-26 11:00:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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ac73a8d849
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v1.7.0
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2021-05-24 15:29:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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e5599bc694
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(v1.6.0.9065) unit tests
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2021-05-24 11:01:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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4fbf9e1720
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(v1.6.0.9064) prepare new release
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2021-05-24 09:34:08 +02:00 |
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dr. M.S. (Matthijs) Berends
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a13fd98e8b
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(v1.6.0.9063) prepare new release
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2021-05-24 09:00:11 +02:00 |
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dr. M.S. (Matthijs) Berends
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06302d296a
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(v1.6.0.9062) code consistency
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2021-05-24 00:06:28 +02:00 |
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dr. M.S. (Matthijs) Berends
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07939b1a14
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(v1.6.0.9061) age() update
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2021-05-23 23:11:16 +02:00 |
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dr. M.S. (Matthijs) Berends
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04ef5b28e7
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(v1.6.0.9050) printing NA in custom_eucast_rules()
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2021-05-20 10:10:40 +02:00 |
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dr. M.S. (Matthijs) Berends
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2413efd5c1
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(v1.6.0.9048) ab selectors overhaul
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2021-05-19 22:55:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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6920c0be41
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(v1.6.0.9047) filter_ab_class() fixes
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2021-05-18 11:29:31 +02:00 |
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dr. M.S. (Matthijs) Berends
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cfb7df823e
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(v1.6.0.9044) betalactams() selector
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2021-05-18 00:53:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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be49131ed7
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(v1.6.0.9043) translation update
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2021-05-17 19:43:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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aeea00881e
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(v1.6.0.9023) new unit test flow
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2021-05-13 19:31:47 +02:00 |
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dr. M.S. (Matthijs) Berends
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655b813e99
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(v1.6.0.9022) unit test fix
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2021-05-13 15:56:12 +02:00 |
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dr. M.S. (Matthijs) Berends
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29dbfa2f49
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(v1.6.0.9021) join functions update
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2021-05-12 18:15:03 +02:00 |
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dr. M.S. (Matthijs) Berends
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5679ccdaf9
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(v1.6.0.9017) extra system codes
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2021-05-04 12:47:33 +02:00 |
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dr. M.S. (Matthijs) Berends
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12a8d59869
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(v1.6.0.9015) italicise_taxonomy
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2021-05-03 10:47:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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a9fd4aa49f
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(v1.6.0.9013) website update
|
2021-04-29 17:16:30 +02:00 |
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dr. M.S. (Matthijs) Berends
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5e06b20d43
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(v1.6.0.9012) unit tests
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2021-04-27 11:28:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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c5fff1c95c
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(v1.6.0.9011) unit tests
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2021-04-27 10:27:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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93683a4ae2
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(v1.6.0.9010) big first_isolate() update
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2021-04-26 23:57:37 +02:00 |
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dr. M.S. (Matthijs) Berends
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5f9e7bd3ee
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(v1.6.0.9009) key_antibiotics update
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2021-04-23 16:13:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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70b803dbb6
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(v1.6.0.9008) unlike, bugfix for col_mo naming
|
2021-04-23 09:59:36 +02:00 |
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dr. M.S. (Matthijs) Berends
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c6289c3fc3
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(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
|
2021-04-20 10:46:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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de66eccf43
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(v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi
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2021-04-16 14:59:57 +02:00 |
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dr. M.S. (Matthijs) Berends
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00d3e437a8
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(v1.6.0.9003) like() fix
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2021-04-16 11:41:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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6ff5448192
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(v1.6.0.9001) support Inf for episodes
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2021-04-12 12:35:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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7a3139f7cc
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(v1.6.0.9000) custom EUCAST rules
|
2021-04-07 08:37:42 +02:00 |
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dr. M.S. (Matthijs) Berends
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551f99dc8f
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v1.6.0
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2021-03-15 07:23:21 +01:00 |
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dr. M.S. (Matthijs) Berends
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4e0a9533ad
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(v1.5.0.9041) SNOMED update
|
2021-03-11 21:42:30 +01:00 |
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dr. M.S. (Matthijs) Berends
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8d6ceb6a15
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(v1.5.0.9040) removal of isolate_identifier
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2021-03-08 09:44:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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a7c9b4c295
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(v1.5.0.9039) handle first isolates for missing antibiograms
|
2021-03-08 02:38:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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450bbe5fb7
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(v1.5.0.9034) unit test fix
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2021-03-07 21:16:45 +01:00 |
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dr. M.S. (Matthijs) Berends
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850c123de7
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(v1.5.0.9032) All group generics for MICs
|
2021-03-07 13:52:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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91dd755cac
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(v1.5.0.9031) math processing of MICs
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2021-03-05 15:36:39 +01:00 |
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dr. M.S. (Matthijs) Berends
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0e0e3c4ffa
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(v1.5.0.9029) added missing families and orders
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2021-03-05 01:31:46 +01:00 |
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dr. M.S. (Matthijs) Berends
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ddf88345f1
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(v1.5.0.9028) Updated taxonomy until March 2021
|
2021-03-04 23:28:32 +01:00 |
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dr. M.S. (Matthijs) Berends
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41f94cde97
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(v1.5.0.9027) website update
|
2021-02-26 12:11:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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1737d56ae4
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(v1.5.0.9026) vignette update, support for GISA
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2021-02-25 12:31:12 +01:00 |
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dr. M.S. (Matthijs) Berends
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a673407904
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(v1.5.0.9025) big plot and ggplot generics update
|
2021-02-25 10:33:08 +01:00 |
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dr. M.S. (Matthijs) Berends
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5ef8cb41a7
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(v1.5.0.9021) improve speed of %like%
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2021-02-21 20:15:09 +01:00 |
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dr. M.S. (Matthijs) Berends
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
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2021-02-17 10:58:13 +01:00 |
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dr. M.S. (Matthijs) Berends
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4a84894f79
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(v1.5.0.9016) only_rsi_columns update, documentation
|
2021-02-08 14:18:42 +01:00 |
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dr. M.S. (Matthijs) Berends
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8fda473e49
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(v1.5.0.9015) unit test fix, grouped first isolates
|
2021-02-04 16:48:16 +01:00 |
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dr. M.S. (Matthijs) Berends
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
|
2021-02-02 23:57:35 +01:00 |
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dr. M.S. (Matthijs) Berends
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20d638c193
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(v1.5.0.9013) updated tibble printing colours
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2021-01-28 16:09:30 +01:00 |
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dr. M.S. (Matthijs) Berends
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331c1f6508
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(v1.5.0.9012) ampc_cephalosporin_resistance for I
|
2021-01-25 21:58:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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24eb4453db
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(v1.5.0.9011) small dosage update
|
2021-01-24 23:27:11 +01:00 |
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dr. M.S. (Matthijs) Berends
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286eaa9699
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(v1.5.0.9010) MDRO vignette update, get_episode for < day
|
2021-01-24 14:48:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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1a88caa119
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(v1.5.0.9009) unit test fixes
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2021-01-22 10:55:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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1ba44776a1
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(v1.5.0.9008) Internal data sets to pkg, speed for auto col determination
|
2021-01-22 10:20:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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4eab095306
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(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
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dr. M.S. (Matthijs) Berends
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e699de955c
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(v1.5.0.9004) custom MDRO guideline
|
2021-01-17 00:26:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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6745f3fb17
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(v1.5.0.9002) doc update
|
2021-01-14 15:51:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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bc00470dca
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(v1.5.0.9001) more informative argument errors
|
2021-01-14 14:41:44 +01:00 |
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dr. M.S. (Matthijs) Berends
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d014955ce0
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
|
2021-01-12 22:08:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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3b84b8be75
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v1.5.0
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2021-01-06 11:16:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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c9de74c81a
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(v1.4.0.9059) ab class selector fix
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2021-01-04 12:29:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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d3f007bf65
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(v1.4.0.9053) unit test old R versions
|
2020-12-29 21:23:01 +01:00 |
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dr. M.S. (Matthijs) Berends
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526f8afb08
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(v1.4.0.9052) replaced all sapply's with type-safe vapply's
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2020-12-28 22:24:33 +01:00 |
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dr. M.S. (Matthijs) Berends
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ccf13dd6c0
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(v1.4.0.9051) ab class
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2020-12-27 23:19:41 +01:00 |
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dr. M.S. (Matthijs) Berends
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afc325c314
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(v1.4.0.9050) ab selectors base R
|
2020-12-27 20:32:40 +01:00 |
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dr. M.S. (Matthijs) Berends
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ed198916bf
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(v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants
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2020-12-27 14:23:11 +01:00 |
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dr. M.S. (Matthijs) Berends
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acbd0cf7ca
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(v1.4.0.9046) get_episode
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2020-12-27 00:07:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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df37584189
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(v1.4.0.9044) mo tibble printing, mo_shortname() fix
|
2020-12-24 23:29:10 +01:00 |
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dr. M.S. (Matthijs) Berends
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128ebcfd62
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(v1.4.0.9043) documentation update
|
2020-12-22 00:51:17 +01:00 |
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dr. M.S. (Matthijs) Berends
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ee70883246
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(v1.4.0.9042) auto dark theme website
|
2020-12-21 22:46:29 +01:00 |
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dr. M.S. (Matthijs) Berends
|
81af41da3a
|
(v1.4.0.9041) updates based on review
|
2020-12-17 16:22:25 +01:00 |
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dr. M.S. (Matthijs) Berends
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1faa816090
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(v1.4.0.9040) LA-MRSA / CA-MRSA
|
2020-12-16 16:18:53 +01:00 |
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dr. M.S. (Matthijs) Berends
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c8bcecf232
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(v1.4.0.9037) random_* functions
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2020-12-12 23:17:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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c9fc7e8a45
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(v1.4.0.9034) MIC printing update
|
2020-12-09 09:40:50 +01:00 |
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dr. M.S. (Matthijs) Berends
|
2145f1d1ba
|
(v1.4.0.9033) documentation update
|
2020-12-08 12:37:25 +01:00 |
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dr. M.S. (Matthijs) Berends
|
1bdb136b3a
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(v1.4.0.9032) auto-data guessing for functions
|
2020-12-07 16:06:42 +01:00 |
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dr. M.S. (Matthijs) Berends
|
e03b3c96d3
|
(v1.4.0.9030) as.mo() fix for known lab codes
|
2020-12-03 16:59:04 +01:00 |
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dr. M.S. (Matthijs) Berends
|
4c114ff4b4
|
(v1.4.0.9029) grey background for backticks, like readr pkg
|
2020-12-01 16:59:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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7b42b15c90
|
(v1.4.0.9026) docu update
|
2020-11-24 11:47:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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b045b571a6
|
(v1.4.0.9025) is_new_episode()
|
2020-11-23 21:50:27 +01:00 |
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dr. M.S. (Matthijs) Berends
|
363218da7e
|
(v1.4.0.9024) is_new_episode()
|
2020-11-17 16:57:41 +01:00 |
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dr. M.S. (Matthijs) Berends
|
deefce9520
|
(v1.4.0.9021) more robust class setting
|
2020-11-16 16:57:55 +01:00 |
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dr. M.S. (Matthijs) Berends
|
05fb213a7c
|
(v1.4.0.9020) mo_is_intrinsic_resistant
|
2020-11-16 11:03:24 +01:00 |
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dr. M.S. (Matthijs) Berends
|
9666b78ea7
|
(v1.4.0.9019) documentation update
|
2020-11-12 11:07:23 +01:00 |
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dr. M.S. (Matthijs) Berends
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f2edac3b67
|
(v1.4.0.9018) reference_data in as.rsi()
|
2020-11-11 18:54:03 +01:00 |