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mirror of https://github.com/msberends/AMR.git synced 2024-12-27 11:26:11 +01:00
Commit Graph

158 Commits

Author SHA1 Message Date
25cef46c59 (v1.8.0) prerelease 1.8.0 2021-12-23 18:56:28 +01:00
1e66a3daf3 (v1.7.1.9068) new logo, unit tests 2021-12-12 11:07:02 +01:00
56f1ce328a (v1.7.1.9067) Support for Swedish and Russian 2021-12-12 09:42:03 +01:00
e18c49ed93 (v1.7.1.9063) not_intrinsic_resistant 2021-12-09 10:48:25 +01:00
e63defe324 (v1.7.1.9062) website update 2021-12-06 11:12:30 +01:00
7965468ccd (v1.7.1.9058) vars selection for set_ab_names() 2021-12-05 22:06:45 +01:00
694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
37e6e35ec4 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
af23f91e5c website update 2021-08-30 15:07:18 +02:00
d6a916d70b (v1.7.1.9030) unit test 2021-08-29 23:50:45 +02:00
a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
4e1efd902c (v1.7.1.9022) rely on vctrs for ab selectors 2021-07-23 21:42:11 +02:00
07939b1a14 (v1.6.0.9061) age() update 2021-05-23 23:11:16 +02:00
5899678b74 (v1.6.0.9019) website fix 2021-05-05 15:47:39 +02:00
f33e61bac7 (v1.6.0.9016) website update and c() fixes 2021-05-03 13:06:43 +02:00
12a8d59869 (v1.6.0.9015) italicise_taxonomy 2021-05-03 10:47:32 +02:00
e405de079c (v1.6.0.9014) as.rsi() for numeric values 2021-04-30 13:18:48 +02:00
a9fd4aa49f (v1.6.0.9013) website update 2021-04-29 17:16:30 +02:00
551f99dc8f v1.6.0 2021-03-15 07:23:21 +01:00
41f94cde97 (v1.5.0.9027) website update 2021-02-26 12:11:29 +01:00
1737d56ae4 (v1.5.0.9026) vignette update, support for GISA 2021-02-25 12:31:12 +01:00
a673407904 (v1.5.0.9025) big plot and ggplot generics update 2021-02-25 10:33:08 +01:00
601ea7377c (v1.5.0.9019) use functions without loading AMR pkg 2021-02-17 10:58:13 +01:00
2eca8c3f01 (v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement 2021-02-02 23:57:35 +01:00
20d638c193 (v1.5.0.9013) updated tibble printing colours 2021-01-28 16:09:30 +01:00
1ba44776a1 (v1.5.0.9008) Internal data sets to pkg, speed for auto col determination 2021-01-22 10:20:41 +01:00
ed198916bf (v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants 2020-12-27 14:23:11 +01:00
8b52f9b1be (v1.4.0.9047) unit tests 2020-12-27 00:30:28 +01:00
acbd0cf7ca (v1.4.0.9046) get_episode 2020-12-27 00:07:00 +01:00
ee70883246 (v1.4.0.9042) auto dark theme website 2020-12-21 22:46:29 +01:00
2145f1d1ba (v1.4.0.9033) documentation update 2020-12-08 12:37:25 +01:00
0e1fdb7dd7 (v1.4.0.9027) docu update 2020-11-25 20:26:02 +01:00
28e77680c5 (v1.4.0) matching score update 2020-10-08 11:16:03 +02:00
3ff871afeb (v1.3.0.9016) mo_uncertainties() overhaul 2020-09-12 08:49:01 +02:00
c4b87fe241 (v1.3.0.9014) as.mo() speed improvement 2020-09-03 12:31:48 +02:00
18e52f2725 (v1.3.0.9013) data sets vignette update 2020-08-29 21:52:51 +02:00
4f72b3bfc4 (v1.3.0.9012) data sets vignette update 2020-08-29 21:41:46 +02:00
818d0441e0 (v1.3.0.9005) website update 2020-08-17 21:49:58 +02:00
dab017a50f (v1.3.0.9004) data sets, as.disk() improvement 2020-08-16 21:38:42 +02:00
08d62bb5d5 (v1.3.0.9002) intrinsic_resistant data set 2020-08-14 13:36:10 +02:00
0d9602a6a9 (v1.3.0.9000) support across() in as.rsi() 2020-08-10 11:44:58 +02:00
de0f7b8950 (v1.2.0.9040) conserve_capped_values for as.rsi() 2020-07-29 12:47:58 +02:00
1b65d76cfb (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
09fba38ea6 (v1.2.0.9035) as.mo() speed improvement 2020-07-22 10:24:23 +02:00
1d66b5c43c (v1.2.0.9032) Permanently move to GitHub 2020-07-09 20:07:39 +02:00
7baa9d3658 (v1.2.0.9030) GitHub Actions 2020-07-09 14:12:11 +02:00
5195e0b9da (v1.2.0.9027) move to github 2020-07-08 17:48:57 +02:00
76fc8e1b14 (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00
40221e5244 (v1.2.0.9003) better terminal colour support 2020-06-05 13:56:05 +02:00
d9a4b0bcaf (v1.1.0.9021) 1st isolates update 2020-05-28 10:51:56 +02:00
ae1969b941 (v1.1.0.9019) mo_source fix 2020-05-25 01:01:14 +02:00
743f9a5364 (v1.1.0.9015) new default eucast_rules 2020-05-20 12:00:17 +02:00
19703eb5d3 (v1.1.0.9012) lose dependencies 2020-05-19 12:08:49 +02:00
c2ffbd9f95 (v1.0.1.9009) prepare for next release 2020-04-15 11:30:28 +02:00
219cff403f (v1.0.1.9004) Support dplyr 1.0.0 2020-03-14 14:05:43 +01:00
6408911922 (v1.0.0.9002) fix lintr 2020-02-20 20:31:42 +01:00
5e2b294351 (v0.9.0.9026) update documentation 2020-02-17 14:38:01 +01:00
c7a76ba713 (v0.9.0.9020) as.mo() improvement 2020-02-09 22:04:29 +01:00
449d9bde35 (v0.9.0.9012) Support for LOINC codes 2020-01-26 20:20:00 +01:00
895e97c310 (v0.9.0.9010) Support R 4.0 2020-01-15 15:24:08 +01:00
ced1a7b7fa (v0.9.0.9008) Happy new year! Add lifecycles 2020-01-05 17:22:09 +01:00
f4669889e5 (v0.9.0.9007) website update 2019-12-27 11:56:54 +01:00
db5dfff0ca (v0.9.0.9006) added CITATION file 2019-12-22 11:43:38 +01:00
cc8cd043e1 (v0.9.0.9004) website fix 2019-12-20 21:06:39 +01:00
2db2a2458a (v0.9.0.9003) as.mo() speedup for fullnames 2019-12-20 15:05:58 +01:00
f7eb6e4107 (v0.9.0.9002) website updates 2019-12-16 11:08:25 +01:00
56ce9bf665 (v0.9.0) website fixes 2019-11-30 12:01:50 +01:00
bb2ed55842 (v0.9.0) v0.9.0 2019-11-29 19:43:23 +01:00
e53cc4990c (v0.8.0.9034) add cid to antivirals 2019-11-23 12:39:57 +01:00
267320f15f (v0.8.0.9033) antivirals data set, cleanup 2019-11-18 12:10:47 +01:00
9060233953 (v0.8.0.9010) mdro bug fix 2019-11-04 11:35:34 +01:00
e2aa4f996b (v0.7.1.9075) new microorganism codes 2019-09-18 15:46:09 +02:00
c7be72f0ce (v0.7.1.9069) documentation update 2019-09-01 13:16:57 +02:00
88ee1b7268 (v0.7.1.9068) gramstain to freq() 2019-08-30 14:50:56 +02:00
920212e815 (v0.7.1.9056) mo and ab subsetting 2019-08-14 14:57:06 +02:00
22a206ffd8 (v0.7.1.9030) eucast_rules() fix 2019-08-08 15:52:07 +02:00
b15d59cf03 (v0.7.1.9009) note for WHOCC 2019-07-09 11:22:46 +02:00
65c6702b21 (v0.7.1.9004) atc class removal 2019-06-27 11:57:45 +02:00
f02679fb63 (v0.7.0.9001) new pathovars, small fixes 2019-06-07 22:47:37 +02:00
702da574c0 website update 2019-06-02 19:50:22 +02:00
bd73988f15 (v0.6.1.9053) prerelease fixes 2019-06-02 19:23:19 +02:00
8de0495008 (v0.6.1.9052) website update 2019-06-01 21:28:18 +02:00
27380fa021 fixes for microorganisms.codes 2019-05-28 16:50:40 +02:00
4ca00e1868 speed improvement eucast_rules(), support more old MO codes 2019-05-20 12:00:18 +02:00
a925a5d2f8 add Disqus to website 2019-05-17 13:01:17 +02:00
4c3cf85a65 ab_info, other bug fixes 2019-05-16 21:20:00 +02:00
68cc7ef0d0 new antibiotics 2019-05-10 16:44:59 +02:00
429814c29b v0.6.0 2019-03-27 11:22:36 +01:00
c6e57ca456 website update 2019-02-20 14:18:11 +01:00
9209787a53 SPSS tutorial 2019-02-14 15:18:17 +01:00
ae44b185e6 fix freq length calculation 2019-02-13 17:14:59 +01:00
76ed26d27e resistance predict update 2019-02-11 10:27:10 +01:00
c56b179857 as.rsi warning, site update 2019-02-09 22:16:24 +01:00
ed30312048 mo codes for WHONET 2019-02-08 16:06:54 +01:00
6aae206320 WHONET/EARS-Net support 2019-01-29 00:06:50 +01:00
f836722269 atc_ functions 2019-01-26 23:22:56 +01:00
5493e1f05d website update 2019-01-25 20:47:57 +01:00
f4ff98b470 WHO update, antibiotics update 2019-01-25 13:18:41 +01:00
3ec44b6e0c website update 2019-01-22 19:55:11 +01:00
9529d097b6 as.mo 2019-01-21 21:24:40 +01:00