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mirror of https://github.com/msberends/AMR.git synced 2024-12-27 22:06:12 +01:00
Commit Graph

64 Commits

Author SHA1 Message Date
5476fecc73 eucast update 2018-11-01 20:23:33 +01:00
86b03577a7 fix for as.mo, added also_single_tested 2018-10-19 13:53:31 +02:00
0ef91be3ac param rules for EUCAST 2018-10-18 12:10:10 +02:00
693f64bdbf new EUCAST rules: clinical breakpoints 2018-10-17 17:32:34 +02:00
5b5b95a47b count_all and some fixes 2018-10-12 16:35:18 +02:00
95c9fdc552 CRAN fixes for release 0.4.0
https://cran.r-project.org/web/checks/check_results_AMR.html
2018-10-09 13:53:33 +02:00
ed17db0263 renamed year columns to ref 2018-10-01 14:44:40 +02:00
3119a221e5 authors from ITIS, diff for freq 2018-10-01 11:39:43 +02:00
92c9cc2608 diff for freq, fix for mo_shortname 2018-09-29 21:54:32 +02:00
768fe17324 removed clipboard functions as it violated CRAN policies 2018-09-28 16:05:18 +02:00
9c566585b0 first inclusion of ITIS data 2018-09-24 23:33:29 +02:00
5d80cef338 added taxonomic data from ITIS 2018-09-17 20:53:32 +02:00
db14781593 add labels_rsi_count 2018-09-16 22:11:17 +02:00
b792a2754e added prevalence column and alterted as.mo algorith to use it, added ab_name as alias 2018-09-16 16:43:29 +02:00
e39a9a8b05 added mo_shortname 2018-09-05 10:51:46 +02:00
b388e3fee7 Support for German and Spanish microorganism properties, cleanup 2018-09-04 11:33:30 +02:00
5965d3c794 replaced bactid by mo 2018-08-31 13:36:19 +02:00
029157b3be 163 new trade names, added ab_tradenames 2018-08-29 12:27:37 +02:00
972fc4f6c7 ab_* functions, mo_* functions, 180 new microorganisms, speed improvement for bactid 2018-08-28 13:51:13 +02:00
2acdb1981c atc and bactid functions, readme update 2018-08-25 22:01:14 +02:00
a100d07da6 removed ratio, better rsi_calc, update for freq 2018-08-24 11:08:20 +02:00
da5379c881 quasiquotation, alpha for geom_rsi 2018-08-23 00:40:36 +02:00
3e87c8f409 count_* functions 2018-08-22 00:02:26 +02:00
ce2cdb9309 support groups for portion_df, update README 2018-08-12 22:34:03 +02:00
1ba7d883fe new ggplot enhancement 2018-08-11 21:30:00 +02:00
53fa198e35 new portion functions 2018-08-10 15:01:05 +02:00
ae2433a020 rsi family for resistance analysis 2018-08-03 14:49:29 +02:00
826694323b new functions R, RI, SI, S 2018-07-29 22:14:51 +02:00
feab1cad6b small fixes 2018-07-28 09:34:03 +02:00
498e88b5cf improvement for forecasting resistance 2018-07-26 16:30:42 +02:00
d9e204031d update to septic_patients, speed improvements 2018-07-25 14:17:04 +02:00
8421638b60 new class bactid 2018-07-23 14:14:03 +02:00
5cb9c541f8 new algorithm key abs 2018-07-17 13:02:05 +02:00
a5a4354651 speed improvements 2018-07-17 10:32:26 +02:00
715a7630ca support format.freq 2018-07-16 16:41:48 +02:00
b6655f6454 Welcome C++! 2018-07-13 17:23:46 +02:00
a28289562a remove print function, out of scope 2018-07-11 20:12:19 +02:00
f63414d519 new g.test, extra unit tests 2018-07-10 12:27:07 +02:00
fc30d3fb13 freq: support for table 2018-07-09 14:02:58 +02:00
14b990d769 kurtosis, skewness, start with ML 2018-07-08 22:14:55 +02:00
34ee0247ac addins and small improvements to microorganisms dataset 2018-07-04 17:20:03 +02:00
10fce8382c include IQR and MAD in freq 2018-07-03 11:30:40 +02:00
3d0d21f322 rename vector2ratio to ratio 2018-07-02 11:14:20 +02:00
2c8d4cb8bf forgot namespace... 2018-07-01 22:37:47 +02:00
3527894b49 new g.test() and edited freq() 2018-07-01 21:40:37 +02:00
649a8025aa add clipboard functions again 2018-06-27 15:54:56 +02:00
a9bd5472d0 top_freq 2018-06-20 14:47:37 +02:00
bdc860e29c atc_groups 2018-06-19 10:05:38 +02:00
uscloud
dcc26dd942 Update freq function 2018-05-22 16:34:22 +02:00
c0fc82c794 Added function n_rsi 2018-05-02 14:56:25 +02:00