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mirror of https://github.com/msberends/AMR.git synced 2024-12-27 12:46:12 +01:00
Commit Graph

85 Commits

Author SHA1 Message Date
8da2467209 updated taxonomy 2022-12-12 00:14:56 +01:00
f6862a139d expert rules 12.0 2022-11-14 15:20:39 +01:00
7ca44fb756 cleanup and new intro logo 2022-11-13 13:44:25 +01:00
9444ed6d1d fix antibiotics error 2022-10-30 21:05:46 +01:00
d40e0ef20b completely updated antibiotics 2022-10-30 14:31:45 +01:00
85e2fbe4a3 remove warnings from unit tests 2022-10-19 11:47:57 +02:00
Dr. Matthijs Berends
cd2acc4a29
New mo algorithm, prepare for 2.0 2022-10-05 09:12:22 +02:00
63fe160322 new rsi_interpretation_history 2022-09-01 15:20:57 +02:00
4d050aef7c styled, unit test fix 2022-08-28 10:31:50 +02:00
303d61b473 new tibble export 2022-08-27 20:49:37 +02:00
952d16de33 new, automated website 2022-08-21 16:37:20 +02:00
1b84564d36 (v1.8.1.9011) update prevalence of some genera 2022-06-03 12:43:25 +02:00
08d387b5ce (v1.8.0.9005) as.rsi() fix 2022-03-10 19:33:25 +01:00
18e8525d10 (v1.8.0.9001) as.mo improvement, fixes #52 2022-02-26 21:58:23 +01:00
578e7dfee9 (v1.7.1.9070) Better WHONET support 2021-12-13 10:18:28 +01:00
e18c49ed93 (v1.7.1.9063) not_intrinsic_resistant 2021-12-09 10:48:25 +01:00
7965468ccd (v1.7.1.9058) vars selection for set_ab_names() 2021-12-05 22:06:45 +01:00
694cf5ba77 (v1.7.1.9054) mdro() update - fixes #49, first_isolate() speedup 2021-11-28 23:01:26 +01:00
37e6e35ec4 (v1.7.1.9051) updated taxonomy, updated git branch name 2021-10-06 13:23:57 +02:00
a44283f998 (v1.7.1.9024) unit tests 2021-08-17 14:34:11 +02:00
a2d249962f (v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47 2021-08-16 21:54:34 +02:00
95050ee3e0 (v1.7.1.9007) Updated antibiotics dataset, fixes #41 2021-06-23 10:03:17 +02:00
bef0f42f66 (v1.7.0.9001) CLSI 2020 guideline 2021-06-01 15:33:06 +02:00
6920c0be41 (v1.6.0.9047) filter_ab_class() fixes 2021-05-18 11:29:31 +02:00
29dbfa2f49 (v1.6.0.9021) join functions update 2021-05-12 18:15:03 +02:00
de66eccf43 (v1.6.0.9006) eucast rules fix for Ochrobactrum anthropi 2021-04-16 14:59:57 +02:00
7a3139f7cc (v1.6.0.9000) custom EUCAST rules 2021-04-07 08:37:42 +02:00
4e0a9533ad (v1.5.0.9041) SNOMED update 2021-03-11 21:42:30 +01:00
4a84894f79 (v1.5.0.9016) only_rsi_columns update, documentation 2021-02-08 14:18:42 +01:00
2eca8c3f01 (v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement 2021-02-02 23:57:35 +01:00
331c1f6508 (v1.5.0.9012) ampc_cephalosporin_resistance for I 2021-01-25 21:58:00 +01:00
4eab095306 (v1.5.0.9006) major documentation update 2021-01-18 16:57:56 +01:00
bc00470dca (v1.5.0.9001) more informative argument errors 2021-01-14 14:41:44 +01:00
d014955ce0 (v.1.5.0.9000) implementation of EUCAST rules v11 (2021) 2021-01-12 22:08:04 +01:00
3b84b8be75 v1.5.0 2021-01-06 11:16:17 +01:00
d3f007bf65 (v1.4.0.9053) unit test old R versions 2020-12-29 21:23:01 +01:00
526f8afb08 (v1.4.0.9052) replaced all sapply's with type-safe vapply's 2020-12-28 22:24:33 +01:00
ed198916bf (v1.4.0.9048) AmpC de-repressed cephalo-resistant mutants 2020-12-27 14:23:11 +01:00
df37584189 (v1.4.0.9044) mo tibble printing, mo_shortname() fix 2020-12-24 23:29:10 +01:00
128ebcfd62 (v1.4.0.9043) documentation update 2020-12-22 00:51:17 +01:00
28e77680c5 (v1.4.0) matching score update 2020-10-08 11:16:03 +02:00
baf510183c (v1.3.0.9038) prefinal 1.4.0 2020-10-04 19:26:43 +02:00
4e0374af29 (v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup 2020-09-29 23:35:46 +02:00
36ec8b0d81 (v1.3.0.9033) skimr fix 2020-09-28 11:00:59 +02:00
c19095a3d5 (v1.3.0.9026) eucast expert rules 3.2 2020-09-24 00:30:11 +02:00
4e40e42011 (v1.3.0.9022) mo_matching_score(), poorman update, as.rsi() fix 2020-09-18 16:05:53 +02:00
9b8db57c65 (v1.3.0.9008) also tibble printing for ab 2020-08-26 15:34:12 +02:00
c8c8bb4e3a (v1.3.0.9006) website update 2020-08-21 11:40:13 +02:00
1b65d76cfb (v1.2.0.9037) survey on website 2020-07-28 18:39:57 +02:00
76fc8e1b14 (v1.2.0.9026) move to github 2020-07-08 14:48:06 +02:00