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python-wrapper

sir-s3-update

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40edc16fdf fix PyPI dr. M.S. (Matthijs) Berends 2024-10-15 17:31:47 +02:00
448b6abb06 fix Python PI publish dr. M.S. (Matthijs) Berends 2024-10-15 17:27:00 +02:00
4ddb872f23 Built site for AMR@2.1.1.9095: 5c4d8fc github-actions 2024-10-15 15:24:09 +00:00
5c4d8fcd2a (v2.1.1.9095) Python support dr. M.S. (Matthijs) Berends 2024-10-15 17:12:55 +02:00
a9017a57bd Built site for AMR@2.1.1.9094: 9450137 github-actions 2024-10-10 14:45:12 +00:00
94501371cd (v2.1.1.9094) fix antibiotics dr. M.S. (Matthijs) Berends 2024-10-10 16:38:20 +02:00
ee18760cfa Built site for AMR@2.1.1.9093: ef79d22 github-actions 2024-10-06 20:53:43 +00:00
ef79d22daf (v2.1.1.9093) New brand names dr. M.S. (Matthijs) Berends 2024-10-06 22:30:52 +02:00
c26c85c21a Built site for AMR@2.1.1.9092: c588902 github-actions 2024-10-06 14:35:11 +00:00
c588902f4c (v2.1.1.9092) Fix website dr. M.S. (Matthijs) Berends 2024-10-06 16:25:31 +02:00
3dd3b6292a Update _pkgdown.yml Matthijs Berends 2024-10-04 16:49:55 +02:00
325664f5aa (v2.1.1.9090) website error dr. M.S. (Matthijs) Berends 2024-10-04 16:08:41 +02:00
0736ac7a7e (v2.1.1.9089) website update dr. M.S. (Matthijs) Berends 2024-10-04 15:44:05 +02:00
9fb891eee2 (v2.1.1.9087) update unit tests dr. M.S. (Matthijs) Berends 2024-10-04 15:28:44 +02:00
74bb1abb0c Built site for AMR@2.1.1.9087: 738689b github-actions 2024-10-02 08:39:39 +00:00
738689beea website (no-verify) dr. M.S. (Matthijs) Berends 2024-10-02 10:31:43 +02:00
4762d07c22 Built site for AMR@2.1.1.9086: 50a9f8f github-actions 2024-10-02 08:29:15 +00:00
50a9f8f0e0 (v2.1.1.9086) website update dr. M.S. (Matthijs) Berends 2024-10-02 10:20:05 +02:00
c99168b4a6 Built site for AMR@2.1.1.9084: 88740b6 github-actions 2024-09-30 21:21:11 +00:00
88740b6f11 Update extra.js Matthijs Berends 2024-09-30 23:15:28 +02:00
75d3c3aadc Built site for AMR@2.1.1.9084: 9141546 github-actions 2024-09-30 20:12:21 +00:00
91415462c0 (v2.1.1.9084) add vignette about Python dr. M.S. (Matthijs) Berends 2024-09-30 22:04:44 +02:00
1f01704397 Built site for AMR@2.1.1.9083: 8907e8e github-actions 2024-09-30 17:20:49 +00:00
8907e8e4af (v2.1.1.9083) update for first_isolate() dr. M.S. (Matthijs) Berends 2024-09-30 19:13:53 +02:00
681fe011fe (v2.1.1.9082) algorithm updates dr. M.S. (Matthijs) Berends 2024-09-30 18:46:55 +02:00
2550023f81 Built site for AMR@2.1.1.9081: ac1c40d github-actions 2024-09-29 20:25:53 +00:00
ac1c40d8bb (v2.1.1.9081) HUGE microorganisms update for fungi! dr. M.S. (Matthijs) Berends 2024-09-29 22:17:56 +02:00
1c32c669a0 Built site for AMR@2.1.1.9080: a558f4c github-actions 2024-09-24 20:49:01 +00:00
a558f4c121 (v2.1.1.9080) fix rescale_mic() for an outside MIC range dr. M.S. (Matthijs) Berends 2024-09-24 22:39:40 +02:00
1ca40e8d67 (v2.1.1.9079) fix for uti in as.sir() dr. M.S. (Matthijs) Berends 2024-09-24 15:34:12 +02:00
62f6837a98 Built site for AMR@2.1.1.9078: 1278924 github-actions 2024-09-22 09:55:27 +00:00
127892430d (v2.1.1.9078) 12 new formatting formats for antibiogram(), prepare for Bayesian WISCA dr. M.S. (Matthijs) Berends 2024-09-22 11:45:51 +02:00
f769324f08 Built site for AMR@2.1.1.9077: 28bf91c github-actions 2024-09-19 12:48:19 +00:00
28bf91cbf5 (v2.1.1.9077) fix logos dr. M.S. (Matthijs) Berends 2024-09-19 14:40:19 +02:00
82239503ee (v2.1.1.9076) dr. M.S. (Matthijs) Berends 2024-09-19 14:22:09 +02:00
a88472a263 test new git hook dr. M.S. (Matthijs) Berends 2024-09-19 14:20:03 +02:00
2f239e59c4 Built site for AMR@2.1.1.9073: 2975697 github-actions 2024-09-19 12:05:20 +00:00
29756977cf no-verify dr. M.S. (Matthijs) Berends 2024-09-19 13:58:41 +02:00
4e96a56b6a (v2.1.1.9073) unit tests dr. M.S. (Matthijs) Berends 2024-09-19 13:57:36 +02:00
ef8ef28650 (v2.1.1.9072) dr. M.S. (Matthijs) Berends 2024-09-19 11:46:17 +02:00
ddb23b6e73 (v2.1.1.9071) update veterinary SIR interpretation, add only_fungi dr. M.S. (Matthijs) Berends 2024-09-19 11:44:56 +02:00
573c0346ed (v2.1.1.9070) fix for mo_current mo (no-verify) dr. M.S. (Matthijs) Berends 2024-07-19 18:04:45 +02:00
83907c9c65 add files (no-verify) dr. M.S. (Matthijs) Berends 2024-07-17 14:31:09 +02:00
7258a491b9 (v2.1.1.9068) fix for mo_url() and as.mo() for synonyms dr. M.S. (Matthijs) Berends 2024-07-17 14:29:55 +02:00
fd917ad2bb Built site for AMR@2.1.1.9066: 63f6790 github-actions 2024-07-16 14:16:29 +00:00
63f6790c58 add (no-verify) dr. M.S. (Matthijs) Berends 2024-07-16 16:10:38 +02:00
b94dac770c (v2.1.1.9066) git hook fix? dr. M.S. (Matthijs) Berends 2024-07-16 16:09:33 +02:00
ff03bb6471 (v2.1.1.9065) unit tests 2 dr. M.S. (Matthijs) Berends 2024-07-16 15:58:18 +02:00
7f344836ea (v2.1.1.9064) unit tests dr. M.S. (Matthijs) Berends 2024-07-16 15:55:58 +02:00
230bbd3722 Built site for AMR@2.1.1.9063: 640888f github-actions 2024-07-16 13:00:55 +00:00
640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update dr. M.S. (Matthijs) Berends 2024-07-16 14:51:57 +02:00
1ffdce6eeb cli-147-2111 github-actions 2024-06-23 14:24:50 +00:00
4f9db23684 check for windows unit test (no-check) dr. M.S. (Matthijs) Berends 2024-06-23 16:18:42 +02:00
dba1186b76 cli-147-2111 github-actions 2024-06-19 13:47:27 +00:00
82585901a7 (v2.1.1.9061) animal host fix dr. M.S. (Matthijs) Berends 2024-06-19 15:41:45 +02:00
3c6ea5dbb1 cli-147-2126 github-actions 2024-06-19 13:14:41 +00:00
c67d003e9e (v2.1.1.9060) SDD results now in as.sir() dr. M.S. (Matthijs) Berends 2024-06-19 15:08:23 +02:00
7b8d4eee83 cli-147-2126 github-actions 2024-06-17 20:32:17 +00:00
0c3d81f32e (v2.1.1.9059) documentation fix dr. M.S. (Matthijs) Berends 2024-06-17 22:26:05 +02:00
12a9c6f82c cli-147-2126 github-actions 2024-06-17 20:25:41 +00:00
1bc2e04e1c (v2.1.1.9058) fix hosts, add translations dr. M.S. (Matthijs) Berends 2024-06-17 22:19:38 +02:00
67acf7984e cli-147-2126 github-actions 2024-06-17 14:58:07 +00:00
a4dc37a4e4 (v2.1.1.9057) fix for missing breakpoints dr. M.S. (Matthijs) Berends 2024-06-17 16:52:12 +02:00
06dde43311 cli-147-2091 github-actions 2024-06-17 12:58:17 +00:00
d9e66fb118 (v2.1.1.9056) example fix dr. M.S. (Matthijs) Berends 2024-06-17 14:52:18 +02:00
74e5d17657 cli-147-2091 github-actions 2024-06-17 12:44:59 +00:00
1e65b5a289 (v2.1.1.9055) example fix dr. M.S. (Matthijs) Berends 2024-06-17 14:36:40 +02:00
72f312843f cli-6201-2091 github-actions 2024-06-17 12:16:15 +00:00
13baf8d7be (v2.1.1.9054) fix examples dr. M.S. (Matthijs) Berends 2024-06-17 13:52:02 +02:00
de6c43b84a cli-147-2091 github-actions 2024-06-17 08:46:35 +00:00
2dee1d71dc (v2.1.1.9053) add verbose to as.sir(), unit test fix dr. M.S. (Matthijs) Berends 2024-06-17 10:38:45 +02:00
fa715b9e44 cli-147-2091 github-actions 2024-06-16 19:00:31 +00:00
68f7795481 (v2.1.1.9052) unit test fix dr. M.S. (Matthijs) Berends 2024-06-16 20:53:50 +02:00
236ec09721 cli-147-2043 github-actions 2024-06-16 09:34:56 +00:00
4ffac7e22d (v2.1.1.9051) fix VGS mo code dr. M.S. (Matthijs) Berends 2024-06-16 11:28:56 +02:00
51f4d0e546 cli-147-2043 github-actions 2024-06-15 13:40:21 +00:00
bdbf5198a2 (v2.1.1.9050) vctrs fix for sir, small documentation fixes dr. M.S. (Matthijs) Berends 2024-06-15 15:33:49 +02:00
8e108a2243 cli-147-2111 github-actions 2024-06-14 20:48:53 +00:00
9bf7584d58 (v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N dr. M.S. (Matthijs) Berends 2024-06-14 22:39:01 +02:00
122d0c536c cli-147-2111 github-actions 2024-06-13 19:01:17 +00:00
de17de1be9 (v2.1.1.9048) vctrs update for sir dr. M.S. (Matthijs) Berends 2024-06-13 20:55:17 +02:00
a96b1c7684 cli-147-2111 github-actions 2024-06-13 05:43:57 +00:00
3179216c81 (v2.1.1.9047) unit test and index dr. M.S. (Matthijs) Berends 2024-06-13 07:37:53 +02:00
79ff526e9c cli-147-2111 github-actions 2024-06-12 12:43:32 +00:00
cd1b37ff69 (v2.1.1.9046) unit test fix dr. M.S. (Matthijs) Berends 2024-06-12 14:37:44 +02:00
98c6dedd1c cli-147-2111 github-actions 2024-06-12 08:41:03 +00:00
c753afcd76 (v2.1.1.9045) fix host in animal guidelines dr. M.S. (Matthijs) Berends 2024-06-12 10:32:43 +02:00
271ab5b1ae cli-147-2111 github-actions 2024-06-10 13:16:37 +00:00
3a54711dfe (v2.1.1.9044) update website dr. M.S. (Matthijs) Berends 2024-06-10 15:10:54 +02:00
374627273f cli-147-2111 github-actions 2024-06-10 08:40:19 +00:00
31207952d3 (v2.1.1.9043) fix sir translation with as.double dr. M.S. (Matthijs) Berends 2024-06-10 10:34:45 +02:00
a3071cf58b (v2.1.1.9042) update translations and example isolates dr. M.S. (Matthijs) Berends 2024-06-09 11:31:04 +02:00
af74e1d4f2 (v2.1.1.9041) antibiotics update dr. M.S. (Matthijs) Berends 2024-06-08 17:35:25 +02:00
e2acc513a5 (v2.1.1.9040) try to put version number in commit msg dr. M.S. (Matthijs) Berends 2024-06-07 12:07:07 +02:00
0bda9e9997 try to add version to commit msg dr. M.S. (Matthijs) Berends 2024-06-04 20:21:12 +02:00
c5981cdeb3 fix unit test dr. M.S. (Matthijs) Berends 2024-06-04 20:17:54 +02:00
062a7eba40 cli-147-2242 github-actions 2024-05-31 19:30:09 +00:00
7c1b564648 fix SIR interpretation for uti dr. M.S. (Matthijs) Berends 2024-05-31 21:24:35 +02:00
83fdd7b9a0 cli-147-2226 github-actions 2024-05-31 08:03:30 +00:00
60c6c21e45 fix SIR interpretation dr. M.S. (Matthijs) Berends 2024-05-31 09:50:54 +02:00