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python-wrapper

sir-s3-update

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v3.0.0

31207952d3 (v2.1.1.9043) fix sir translation with as.double dr. M.S. (Matthijs) Berends 2024-06-10 10:34:45 +02:00
a3071cf58b (v2.1.1.9042) update translations and example isolates dr. M.S. (Matthijs) Berends 2024-06-09 11:31:04 +02:00
af74e1d4f2 (v2.1.1.9041) antibiotics update dr. M.S. (Matthijs) Berends 2024-06-08 17:35:25 +02:00
e2acc513a5 (v2.1.1.9040) try to put version number in commit msg dr. M.S. (Matthijs) Berends 2024-06-07 12:07:07 +02:00
0bda9e9997 try to add version to commit msg dr. M.S. (Matthijs) Berends 2024-06-04 20:21:12 +02:00
c5981cdeb3 fix unit test dr. M.S. (Matthijs) Berends 2024-06-04 20:17:54 +02:00
062a7eba40 cli-147-2242 github-actions 2024-05-31 19:30:09 +00:00
7c1b564648 fix SIR interpretation for uti dr. M.S. (Matthijs) Berends 2024-05-31 21:24:35 +02:00
83fdd7b9a0 cli-147-2226 github-actions 2024-05-31 08:03:30 +00:00
60c6c21e45 fix SIR interpretation dr. M.S. (Matthijs) Berends 2024-05-31 09:50:54 +02:00
0f7643dd96 cli-147-2226 github-actions 2024-05-30 14:45:24 +00:00
ba4dc20cf3 autoplot fix dr. M.S. (Matthijs) Berends 2024-05-30 16:39:59 +02:00
0182344680 cli-147-2226 github-actions 2024-05-30 14:07:29 +00:00
d4490c7f25 fix sorting of MICs, MIC autoplot titles dr. M.S. (Matthijs) Berends 2024-05-30 15:50:17 +02:00
82ec49a31f cli-147-2196 github-actions 2024-05-24 13:13:13 +00:00
c3ce1b551d rename limit_mic_range() to rescale_mic() dr. M.S. (Matthijs) Berends 2024-05-24 15:07:41 +02:00
0b0a4b6a51 cli-147-2196 github-actions 2024-05-20 19:35:19 +00:00
d214f74e25 allow column name for ab in as.sir() dr. M.S. (Matthijs) Berends 2024-05-20 21:29:13 +02:00
704eb041fa cli-147-2226 github-actions 2024-05-20 17:04:05 +00:00
fc269e667d unit test fix dr. M.S. (Matthijs) Berends 2024-05-20 18:58:35 +02:00
08a27922a8 new SDD and N for as.sir() dr. M.S. (Matthijs) Berends 2024-05-20 15:27:04 +02:00
bb51c7b8b3 cli-147-2226 github-actions 2024-05-12 14:32:36 +00:00
b68f47d985 improved algorithm of as.ab() dr. M.S. (Matthijs) Berends 2024-05-12 16:24:44 +02:00
1bce7ed3d3 fix git hooks dr. M.S. (Matthijs) Berends 2024-04-24 11:58:16 +02:00
7f18e66c4e unit test fix dr. M.S. (Matthijs) Berends 2024-04-24 11:42:43 +02:00
fad0489eed cli-154-2226 github-actions 2024-04-24 08:06:58 +00:00
3e5c7d45c6 update intro logo dr. M.S. (Matthijs) Berends 2024-04-24 09:58:24 +02:00
25089e811e correct for high-level abx dr. M.S. (Matthijs) Berends 2024-04-24 09:50:32 +02:00
eb326fa2fa cli-154-2226 github-actions 2024-04-23 09:02:01 +00:00
0d8a91db49 rename pre-commit hook to pre-commit checks (no-check) dr. M.S. (Matthijs) Berends 2024-04-23 10:55:48 +02:00
25024fa1d8 cli-154-2226 github-actions 2024-04-23 08:39:01 +00:00
04df6dfcf5 fix website nav header (no-check) dr. M.S. (Matthijs) Berends 2024-04-23 10:33:26 +02:00
35f095cceb fixes #148 dr. M.S. (Matthijs) Berends 2024-04-23 09:34:05 +02:00
6eb417125c cli-154-2226 github-actions 2024-04-19 08:24:46 +00:00
2899b3c840 new mo_group_members() dr. M.S. (Matthijs) Berends 2024-04-19 10:18:21 +02:00
158b328929 Built site for AMR: 2.1.1.9018@7e7bc9d github-actions 2024-04-08 08:04:57 +00:00
7e7bc9d56e Merge branch 'main' of https://github.com/msberends/AMR dr. M.S. (Matthijs) Berends 2024-04-08 09:58:54 +02:00
d2c5e4b749 update website colours dr. M.S. (Matthijs) Berends 2024-04-08 09:55:21 +02:00
62d8ae3b8a Built site for AMR: 2.1.1.9017@42a23e8 github-actions 2024-04-07 22:58:24 +00:00
42a23e89a8 Update DESCRIPTION Matthijs Berends 2024-04-08 00:52:25 +02:00
94e9a4d99b update MIC implementation dr. M.S. (Matthijs) Berends 2024-04-07 20:22:59 +02:00
d1a90f83ff Built site for AMR: 2.1.1.9016@0039cb0 github-actions 2024-04-05 14:58:51 +00:00
0039cb05d6 update MIC comparisons dr. M.S. (Matthijs) Berends 2024-04-05 16:44:43 +02:00
d6ec56c776 Update index.html Matthijs Berends 2024-03-12 20:59:37 +01:00
9b631f2607 Built site for AMR: 2.1.1.9015@4170def github-actions 2024-03-09 15:53:10 +00:00
4170def0ec unit test dr. M.S. (Matthijs) Berends 2024-03-09 16:46:59 +01:00
cd0d80903b Built site for AMR: 2.1.1.9014@bc4f851 github-actions 2024-03-03 22:31:52 +00:00
bc4f8515e2 new Norwegian link dr. M.S. (Matthijs) Berends 2024-03-03 23:24:57 +01:00
0b8e89c845 Built site for AMR: 2.1.1.9013@f2d245b github-actions 2024-03-03 22:05:59 +00:00
f2d245b0cb update navbar colours dr. M.S. (Matthijs) Berends 2024-03-03 19:07:09 +01:00
ab367558fe Built site for AMR: 2.1.1.9012@46634bf github-actions 2024-02-25 16:02:51 +00:00
46634bfcaa navbar colour dr. M.S. (Matthijs) Berends 2024-02-25 16:48:04 +01:00
d707152fc2 Built site for AMR: 2.1.1.9010@8b43fed github-actions 2024-02-25 13:46:03 +00:00
8b43fed94d Update _pkgdown.yml Matthijs Berends 2024-02-25 14:40:19 +01:00
8d077149fa new logo dr. M.S. (Matthijs) Berends 2024-02-25 14:20:43 +01:00
430d460276 Built site for AMR: 2.1.1.9009@b303662 github-actions 2024-02-24 18:32:41 +00:00
b303662ec6 fix veterinary for R<4 dr. M.S. (Matthijs) Berends 2024-02-24 19:26:35 +01:00
8611815e20 Built site for AMR: 2.1.1.9008@35963ca github-actions 2024-02-24 17:58:43 +00:00
35963ca3dc vctrs fix dr. M.S. (Matthijs) Berends 2024-02-24 18:51:37 +01:00
4aa5413641 fix unit test dr. M.S. (Matthijs) Berends 2024-02-24 18:14:50 +01:00
7be4dabbc0 support veterinary MIC/disk translation dr. M.S. (Matthijs) Berends 2024-02-24 15:16:52 +01:00
1460fadf40 Built site for AMR: 2.1.1.9004@74ea6c8 github-actions 2024-02-13 12:53:34 +00:00
74ea6c8c60 Added support for 'html' in italicize_taxonomy() (#134) Emil Rossing 2024-02-13 13:47:07 +01:00
4720b842e6 Built site for AMR: 2.1.1.9004@83e92fd github-actions 2023-12-04 07:26:20 +00:00
83e92fd88c docu fix dr. M.S. (Matthijs) Berends 2023-12-04 08:19:02 +01:00
d65eb144db Built site for AMR: 2.1.1.9003@7059568 github-actions 2023-12-03 15:57:17 +00:00
7059568581 fix scale functions dr. M.S. (Matthijs) Berends 2023-12-03 16:51:54 +01:00
09881c5781 Built site for AMR: 2.1.1.9002@c746176 github-actions 2023-12-03 10:41:04 +00:00
c7461766ce Remove RSI from package, add extra MIC scale functions dr. M.S. (Matthijs) Berends 2023-12-03 11:34:48 +01:00
3440c43dc4 Built site for AMR: 2.1.1.9001@6f417d0 github-actions 2023-12-03 00:14:24 +00:00
6f417d0ef2 add scale_x_mic() dr. M.S. (Matthijs) Berends 2023-12-03 01:06:00 +01:00
3c05a8bfc8 Built site for AMR: 2.1.1@4c11a7b github-actions 2023-10-22 13:59:03 +00:00
4c11a7bd9c v2.1.1 v2.1.1 dr. M.S. (Matthijs) Berends 2023-10-22 15:51:27 +02:00
8fe9437f7c Built site for AMR: 2.1.0.9004@ca72a64 github-actions 2023-10-20 13:51:27 +00:00
ca72a646d0 scientific notation for MICs dr. M.S. (Matthijs) Berends 2023-10-20 15:45:00 +02:00
d7a1dbb2b9 Built site for AMR: 2.1.0.9003@bcab4bc github-actions 2023-10-20 13:13:46 +00:00
bcab4bc9ba Fixes #123 dr. M.S. (Matthijs) Berends 2023-10-20 15:07:11 +02:00
8c3ab46914 Built site for AMR: 2.1.0.9002@7cda9e5 github-actions 2023-10-20 13:01:19 +00:00
7cda9e575b prepare for CRAN dr. M.S. (Matthijs) Berends 2023-10-20 14:51:48 +02:00
9f32027abc Built site for AMR: 2.1.0.9001@7dc9679 github-actions 2023-07-20 06:32:45 +00:00
7dc96794be fix rounding MICs on R-devel dr. M.S. (Matthijs) Berends 2023-07-20 08:24:27 +02:00
bc0fb5bd03 Built site for AMR: 2.1.0@a2cbbf4 github-actions 2023-07-16 14:25:05 +00:00
a2cbbf470e AMR v2.1.0 pre-release v2.1.0 dr. M.S. (Matthijs) Berends 2023-07-16 16:18:53 +02:00
faed08a2c9 Built site for AMR: 2.0.0.9045@7a4628b github-actions 2023-07-14 08:58:39 +00:00
7a4628b73f Added C. freundii complex and Y. pseudotuberculosis complex dr. M.S. (Matthijs) Berends 2023-07-14 10:49:06 +02:00
7e5894fcd4 Built site for AMR: 2.0.0.9044@fd480d1 github-actions 2023-07-14 08:02:32 +00:00
fd480d1a9a console hyperlink fix dr. M.S. (Matthijs) Berends 2023-07-14 09:50:13 +02:00
9bc1b49ea6 Built site for AMR: 2.0.0.9041@08f7256 github-actions 2023-07-13 11:52:09 +00:00
08f7256852 include unit tests again dr. M.S. (Matthijs) Berends 2023-07-13 12:45:14 +01:00
be8832a827 Built site for AMR: 2.0.0.9041@ddd01f9 github-actions 2023-07-13 08:50:52 +00:00
ddd01f9410 test to remove unit tests from build dr. M.S. (Matthijs) Berends 2023-07-13 09:42:37 +01:00
822244837d Built site for AMR: 2.0.0.9041@eff164e github-actions 2023-07-12 19:34:31 +00:00
eff164ecb1 indicate unique identifiers dr. M.S. (Matthijs) Berends 2023-07-12 21:26:32 +02:00
645974fb29 Built site for AMR: 2.0.0.9040@ea2a465 github-actions 2023-07-12 14:33:48 +00:00
363db948a2 Built site for AMR: 2.0.0.9039@e1b4f99 github-actions 2023-07-12 14:28:22 +00:00
ea2a4652e9 mouse-hover fixes dr. M.S. (Matthijs) Berends 2023-07-12 15:27:43 +01:00
e1b4f99f4f breakpoints fixes dr. M.S. (Matthijs) Berends 2023-07-12 15:20:04 +01:00
619bcd7ee9 Built site for AMR: 2.0.0.9038@0c46f61 github-actions 2023-07-12 14:11:31 +00:00
0c46f61260 MO group fixes dr. M.S. (Matthijs) Berends 2023-07-12 15:04:48 +01:00
b5e161a822 Built site for AMR: 2.0.0.9035@7cd9ca2 github-actions 2023-07-12 10:50:41 +00:00