 dr. M.S. (Matthijs) Berends
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13baf8d7be
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(v2.1.1.9054) fix examples
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2024-06-17 13:52:02 +02:00 |
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dr. M.S. (Matthijs) Berends
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2dee1d71dc
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(v2.1.1.9053) add `verbose` to `as.sir()`, unit test fix
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2024-06-17 10:38:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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68f7795481
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(v2.1.1.9052) unit test fix
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2024-06-16 20:53:50 +02:00 |
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dr. M.S. (Matthijs) Berends
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4ffac7e22d
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(v2.1.1.9051) fix VGS mo code
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2024-06-16 11:28:56 +02:00 |
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dr. M.S. (Matthijs) Berends
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bdbf5198a2
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(v2.1.1.9050) vctrs fix for `sir`, small documentation fixes
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2024-06-15 15:33:49 +02:00 |
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dr. M.S. (Matthijs) Berends
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9bf7584d58
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(v2.1.1.9049) new 2024 breakpoints, add `AMO`, set NI instead of N
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2024-06-14 22:39:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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de17de1be9
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(v2.1.1.9048) vctrs update for sir
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2024-06-13 20:55:17 +02:00 |
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dr. M.S. (Matthijs) Berends
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3179216c81
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(v2.1.1.9047) unit test and index
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2024-06-13 07:37:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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31207952d3
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(v2.1.1.9043) fix sir translation with as.double
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2024-06-10 10:34:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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a3071cf58b
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(v2.1.1.9042) update translations and example isolates
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2024-06-09 11:31:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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af74e1d4f2
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(v2.1.1.9041) antibiotics update
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2024-06-08 17:35:25 +02:00 |
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dr. M.S. (Matthijs) Berends
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c5981cdeb3
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fix unit test
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2024-06-04 20:17:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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7c1b564648
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fix SIR interpretation for uti
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2024-05-31 21:24:35 +02:00 |
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dr. M.S. (Matthijs) Berends
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60c6c21e45
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fix SIR interpretation
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2024-05-31 09:50:54 +02:00 |
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dr. M.S. (Matthijs) Berends
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c3ce1b551d
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rename `limit_mic_range()` to `rescale_mic()`
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2024-05-24 15:07:41 +02:00 |
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dr. M.S. (Matthijs) Berends
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d214f74e25
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allow column name for `ab` in `as.sir()`
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2024-05-20 21:29:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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08a27922a8
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new SDD and N for `as.sir()`
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2024-05-20 15:27:04 +02:00 |
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dr. M.S. (Matthijs) Berends
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2899b3c840
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new `mo_group_members()`
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2024-04-19 10:18:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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0039cb05d6
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update MIC comparisons
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2024-04-05 16:44:43 +02:00 |
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dr. M.S. (Matthijs) Berends
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bc4f8515e2
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new Norwegian link
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2024-03-03 23:24:57 +01:00 |
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dr. M.S. (Matthijs) Berends
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7be4dabbc0
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support veterinary MIC/disk translation
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2024-02-24 15:16:52 +01:00 |
Emil Rossing
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74ea6c8c60
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Added support for 'html' in italicize_taxonomy() (#134)
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2024-02-13 13:47:07 +01:00 |
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dr. M.S. (Matthijs) Berends
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83e92fd88c
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docu fix
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2023-12-04 08:19:02 +01:00 |
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dr. M.S. (Matthijs) Berends
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7059568581
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fix scale functions
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2023-12-03 16:51:54 +01:00 |
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dr. M.S. (Matthijs) Berends
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c7461766ce
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Remove RSI from package, add extra MIC scale functions
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2023-12-03 11:34:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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6f417d0ef2
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add `scale_x_mic()`
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2023-12-03 01:06:00 +01:00 |
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dr. M.S. (Matthijs) Berends
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4c11a7bd9c
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v2.1.1
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2023-10-22 15:51:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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ca72a646d0
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scientific notation for MICs
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2023-10-20 15:45:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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7cda9e575b
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prepare for CRAN
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2023-10-20 14:51:48 +02:00 |
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dr. M.S. (Matthijs) Berends
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7a4628b73f
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Added C. freundii complex and Y. pseudotuberculosis complex
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2023-07-14 10:49:06 +02:00 |
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dr. M.S. (Matthijs) Berends
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fd480d1a9a
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console hyperlink fix
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2023-07-14 09:50:13 +02:00 |
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dr. M.S. (Matthijs) Berends
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eff164ecb1
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indicate unique identifiers
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2023-07-12 21:26:32 +02:00 |
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dr. M.S. (Matthijs) Berends
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e1b4f99f4f
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breakpoints fixes
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2023-07-12 15:20:04 +01:00 |
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dr. M.S. (Matthijs) Berends
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0c46f61260
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MO group fixes
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2023-07-12 15:04:48 +01:00 |
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dr. M.S. (Matthijs) Berends
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9cf054903b
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version bump
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2023-07-12 11:42:29 +01:00 |
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dr. M.S. (Matthijs) Berends
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8df1cd8d97
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interpretation fixes
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2023-07-11 09:50:45 +02:00 |
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dr. M.S. (Matthijs) Berends
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dab20c09f6
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unit test
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2023-07-10 18:30:26 +02:00 |
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dr. M.S. (Matthijs) Berends
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a4e2e25e3f
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reftbl in plots, speedup for as.sir() and mo_validate
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2023-07-10 16:43:46 +02:00 |
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dr. M.S. (Matthijs) Berends
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70c601ca11
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breakpoints UTI interpretation fix
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2023-07-10 13:41:52 +02:00 |
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dr. M.S. (Matthijs) Berends
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acb534102b
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new species groups, updated clinical breakpoints
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2023-07-08 17:30:05 +02:00 |
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dr. M.S. (Matthijs) Berends
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2d97cca6d9
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fix `reference_df` endless loop
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2023-06-26 13:52:02 +02:00 |
Dr. Matthijs Berends
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f065945d7b
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Update clinical breakpoints and fix some `as.mo()` bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
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2023-06-22 15:10:59 +02:00 |
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dr. M.S. (Matthijs) Berends
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9591688811
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documentation update
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2023-05-27 10:39:22 +02:00 |
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dr. M.S. (Matthijs) Berends
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e1966503ee
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unit testing R4.3
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2023-05-26 20:37:00 +02:00 |
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dr. M.S. (Matthijs) Berends
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766db4e21f
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as.mo fix
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2023-05-26 19:20:21 +02:00 |
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dr. M.S. (Matthijs) Berends
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c6135d2082
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updated microorganism codes
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2023-05-26 16:10:01 +02:00 |
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dr. M.S. (Matthijs) Berends
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0bcf55d3b6
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improve `as.mo()`
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2023-05-24 15:55:53 +02:00 |
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dr. M.S. (Matthijs) Berends
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91fa73dedf
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add oxygen tolerance
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2023-05-11 21:56:27 +02:00 |
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dr. M.S. (Matthijs) Berends
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bf08d136a0
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fix coercing `NA` to custom codes, fixes #107
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2023-05-08 13:04:18 +02:00 |
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dr. M.S. (Matthijs) Berends
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9148a2dcf4
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fix `mo_rank()` for 'unknown' MOs
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2023-04-20 15:20:41 +02:00 |