dr. M.S. (Matthijs) Berends
de17de1be9
(v2.1.1.9048) vctrs update for sir
2024-06-13 20:55:17 +02:00
dr. M.S. (Matthijs) Berends
3179216c81
(v2.1.1.9047) unit test and index
2024-06-13 07:37:53 +02:00
dr. M.S. (Matthijs) Berends
31207952d3
(v2.1.1.9043) fix sir translation with as.double
2024-06-10 10:34:45 +02:00
dr. M.S. (Matthijs) Berends
a3071cf58b
(v2.1.1.9042) update translations and example isolates
2024-06-09 11:31:04 +02:00
dr. M.S. (Matthijs) Berends
af74e1d4f2
(v2.1.1.9041) antibiotics update
2024-06-08 17:35:25 +02:00
dr. M.S. (Matthijs) Berends
c5981cdeb3
fix unit test
2024-06-04 20:17:54 +02:00
dr. M.S. (Matthijs) Berends
7c1b564648
fix SIR interpretation for uti
2024-05-31 21:24:35 +02:00
dr. M.S. (Matthijs) Berends
60c6c21e45
fix SIR interpretation
2024-05-31 09:50:54 +02:00
dr. M.S. (Matthijs) Berends
c3ce1b551d
rename limit_mic_range() to rescale_mic()
2024-05-24 15:07:41 +02:00
dr. M.S. (Matthijs) Berends
d214f74e25
allow column name for ab in as.sir()
2024-05-20 21:29:13 +02:00
dr. M.S. (Matthijs) Berends
08a27922a8
new SDD and N for as.sir()
2024-05-20 15:27:04 +02:00
dr. M.S. (Matthijs) Berends
2899b3c840
new mo_group_members()
2024-04-19 10:18:21 +02:00
dr. M.S. (Matthijs) Berends
0039cb05d6
update MIC comparisons
2024-04-05 16:44:43 +02:00
dr. M.S. (Matthijs) Berends
bc4f8515e2
new Norwegian link
2024-03-03 23:24:57 +01:00
dr. M.S. (Matthijs) Berends
7be4dabbc0
support veterinary MIC/disk translation
2024-02-24 15:16:52 +01:00
Emil Rossing
74ea6c8c60
Added support for 'html' in italicize_taxonomy() ( #134 )
2024-02-13 13:47:07 +01:00
dr. M.S. (Matthijs) Berends
83e92fd88c
docu fix
2023-12-04 08:19:02 +01:00
dr. M.S. (Matthijs) Berends
7059568581
fix scale functions
2023-12-03 16:51:54 +01:00
dr. M.S. (Matthijs) Berends
c7461766ce
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
dr. M.S. (Matthijs) Berends
6f417d0ef2
add scale_x_mic()
2023-12-03 01:06:00 +01:00
dr. M.S. (Matthijs) Berends
4c11a7bd9c
v2.1.1
2023-10-22 15:51:27 +02:00
dr. M.S. (Matthijs) Berends
ca72a646d0
scientific notation for MICs
2023-10-20 15:45:00 +02:00
dr. M.S. (Matthijs) Berends
7cda9e575b
prepare for CRAN
2023-10-20 14:51:48 +02:00
dr. M.S. (Matthijs) Berends
7a4628b73f
Added C. freundii complex and Y. pseudotuberculosis complex
2023-07-14 10:49:06 +02:00
dr. M.S. (Matthijs) Berends
fd480d1a9a
console hyperlink fix
2023-07-14 09:50:13 +02:00
dr. M.S. (Matthijs) Berends
eff164ecb1
indicate unique identifiers
2023-07-12 21:26:32 +02:00
dr. M.S. (Matthijs) Berends
e1b4f99f4f
breakpoints fixes
2023-07-12 15:20:04 +01:00
dr. M.S. (Matthijs) Berends
0c46f61260
MO group fixes
2023-07-12 15:04:48 +01:00
dr. M.S. (Matthijs) Berends
9cf054903b
version bump
2023-07-12 11:42:29 +01:00
dr. M.S. (Matthijs) Berends
8df1cd8d97
interpretation fixes
2023-07-11 09:50:45 +02:00
dr. M.S. (Matthijs) Berends
dab20c09f6
unit test
2023-07-10 18:30:26 +02:00
dr. M.S. (Matthijs) Berends
a4e2e25e3f
reftbl in plots, speedup for as.sir() and mo_validate
2023-07-10 16:43:46 +02:00
dr. M.S. (Matthijs) Berends
70c601ca11
breakpoints UTI interpretation fix
2023-07-10 13:41:52 +02:00
dr. M.S. (Matthijs) Berends
acb534102b
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
dr. M.S. (Matthijs) Berends
2d97cca6d9
fix reference_df endless loop
2023-06-26 13:52:02 +02:00
Dr. Matthijs Berends
f065945d7b
Update clinical breakpoints and fix some as.mo() bugs ( #117 )
...
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102 , fixes #112 , fixes #113 , fixes #114 , fixes #115
* docs
* implement ecoffs
* unit tests
2023-06-22 15:10:59 +02:00
dr. M.S. (Matthijs) Berends
9591688811
documentation update
2023-05-27 10:39:22 +02:00
dr. M.S. (Matthijs) Berends
e1966503ee
unit testing R4.3
2023-05-26 20:37:00 +02:00
dr. M.S. (Matthijs) Berends
766db4e21f
as.mo fix
2023-05-26 19:20:21 +02:00
dr. M.S. (Matthijs) Berends
c6135d2082
updated microorganism codes
2023-05-26 16:10:01 +02:00
dr. M.S. (Matthijs) Berends
0bcf55d3b6
improve as.mo()
2023-05-24 15:55:53 +02:00
dr. M.S. (Matthijs) Berends
91fa73dedf
add oxygen tolerance
2023-05-11 21:56:27 +02:00
dr. M.S. (Matthijs) Berends
bf08d136a0
fix coercing NA to custom codes, fixes #107
2023-05-08 13:04:18 +02:00
dr. M.S. (Matthijs) Berends
9148a2dcf4
fix mo_rank() for 'unknown' MOs
2023-04-20 15:20:41 +02:00
dr. M.S. (Matthijs) Berends
02322ac2ee
Fix PK/PD breakpoints
2023-04-19 00:31:31 +02:00
dr. M.S. (Matthijs) Berends
ed70f95380
Fix clinical breakpoints
2023-04-14 23:14:34 +02:00
dr. M.S. (Matthijs) Berends
147f9112e9
Fix some WHONET codes
2023-04-14 11:12:26 +02:00
dr. M.S. (Matthijs) Berends
549790c2a6
website
2023-03-20 21:59:50 +01:00
dr. M.S. (Matthijs) Berends
c28cfa3a77
fix documentation
2023-03-16 08:55:37 +01:00
dr. M.S. (Matthijs) Berends
dd7cc86485
help page %like%
2023-03-14 19:49:50 +01:00
