dr. M.S. (Matthijs) Berends
|
c67d003e9e
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(v2.1.1.9060) SDD results now in `as.sir()`
|
2024-06-19 15:08:23 +02:00 |
dr. M.S. (Matthijs) Berends
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1bc2e04e1c
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(v2.1.1.9058) fix hosts, add translations
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2024-06-17 22:19:38 +02:00 |
dr. M.S. (Matthijs) Berends
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4ffac7e22d
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(v2.1.1.9051) fix VGS mo code
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2024-06-16 11:28:56 +02:00 |
dr. M.S. (Matthijs) Berends
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9bf7584d58
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(v2.1.1.9049) new 2024 breakpoints, add `AMO`, set NI instead of N
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2024-06-14 22:39:01 +02:00 |
dr. M.S. (Matthijs) Berends
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de17de1be9
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(v2.1.1.9048) vctrs update for sir
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2024-06-13 20:55:17 +02:00 |
dr. M.S. (Matthijs) Berends
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3179216c81
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(v2.1.1.9047) unit test and index
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2024-06-13 07:37:53 +02:00 |
dr. M.S. (Matthijs) Berends
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a3071cf58b
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(v2.1.1.9042) update translations and example isolates
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2024-06-09 11:31:04 +02:00 |
dr. M.S. (Matthijs) Berends
|
af74e1d4f2
|
(v2.1.1.9041) antibiotics update
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2024-06-08 17:35:25 +02:00 |
dr. M.S. (Matthijs) Berends
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3e5c7d45c6
|
update intro logo
|
2024-04-24 09:58:24 +02:00 |
dr. M.S. (Matthijs) Berends
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0d8a91db49
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rename pre-commit hook to pre-commit checks (no-check)
|
2024-04-23 10:55:48 +02:00 |
dr. M.S. (Matthijs) Berends
|
0039cb05d6
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update MIC comparisons
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2024-04-05 16:44:43 +02:00 |
dr. M.S. (Matthijs) Berends
|
bc4f8515e2
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new Norwegian link
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2024-03-03 23:24:57 +01:00 |
dr. M.S. (Matthijs) Berends
|
8d077149fa
|
new logo
|
2024-02-25 14:20:43 +01:00 |
dr. M.S. (Matthijs) Berends
|
7be4dabbc0
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support veterinary MIC/disk translation
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2024-02-24 15:16:52 +01:00 |
dr. M.S. (Matthijs) Berends
|
bcab4bc9ba
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Fixes #123
|
2023-10-20 15:07:11 +02:00 |
dr. M.S. (Matthijs) Berends
|
7cda9e575b
|
prepare for CRAN
|
2023-10-20 14:51:48 +02:00 |
dr. M.S. (Matthijs) Berends
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7a4628b73f
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Added C. freundii complex and Y. pseudotuberculosis complex
|
2023-07-14 10:49:06 +02:00 |
dr. M.S. (Matthijs) Berends
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e1b4f99f4f
|
breakpoints fixes
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2023-07-12 15:20:04 +01:00 |
dr. M.S. (Matthijs) Berends
|
0c46f61260
|
MO group fixes
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2023-07-12 15:04:48 +01:00 |
dr. M.S. (Matthijs) Berends
|
7cd9ca274c
|
add strep groups to ABCG
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2023-07-12 11:41:25 +01:00 |
dr. M.S. (Matthijs) Berends
|
5e1221bceb
|
unit test
|
2023-07-10 19:04:12 +02:00 |
dr. M.S. (Matthijs) Berends
|
70c601ca11
|
breakpoints UTI interpretation fix
|
2023-07-10 13:41:52 +02:00 |
dr. M.S. (Matthijs) Berends
|
acb534102b
|
new species groups, updated clinical breakpoints
|
2023-07-08 17:30:05 +02:00 |
dr. M.S. (Matthijs) Berends
|
2d97cca6d9
|
fix `reference_df` endless loop
|
2023-06-26 13:52:02 +02:00 |
Dr. Matthijs Berends
|
f065945d7b
|
Update clinical breakpoints and fix some `as.mo()` bugs (#117)
* Updates clinical breakpoints EUCAST/CLSI 2023, fixes #102, fixes #112, fixes #113, fixes #114, fixes #115
* docs
* implement ecoffs
* unit tests
|
2023-06-22 15:10:59 +02:00 |
dr. M.S. (Matthijs) Berends
|
9591688811
|
documentation update
|
2023-05-27 10:39:22 +02:00 |
dr. M.S. (Matthijs) Berends
|
8179092c57
|
add XPT files for SAS software
|
2023-05-12 10:07:55 +02:00 |
dr. M.S. (Matthijs) Berends
|
91fa73dedf
|
add oxygen tolerance
|
2023-05-11 21:56:27 +02:00 |
dr. M.S. (Matthijs) Berends
|
bf08d136a0
|
fix coercing `NA` to custom codes, fixes #107
|
2023-05-08 13:04:18 +02:00 |
dr. M.S. (Matthijs) Berends
|
9148a2dcf4
|
fix `mo_rank()` for 'unknown' MOs
|
2023-04-20 15:20:41 +02:00 |
dr. M.S. (Matthijs) Berends
|
02322ac2ee
|
Fix PK/PD breakpoints
|
2023-04-19 00:31:31 +02:00 |
dr. M.S. (Matthijs) Berends
|
cabffb22fd
|
anaerobic codes
|
2023-04-17 11:26:19 +02:00 |
dr. M.S. (Matthijs) Berends
|
1a02d302d4
|
Fix translatable strings
|
2023-04-15 09:32:13 +02:00 |
dr. M.S. (Matthijs) Berends
|
ed70f95380
|
Fix clinical breakpoints
|
2023-04-14 23:14:34 +02:00 |
dr. M.S. (Matthijs) Berends
|
147f9112e9
|
Fix some WHONET codes
|
2023-04-14 11:12:26 +02:00 |
dr. M.S. (Matthijs) Berends
|
c28cfa3a77
|
fix documentation
|
2023-03-16 08:55:37 +01:00 |
dr. M.S. (Matthijs) Berends
|
262598b8d7
|
support for old rsi arguments
|
2023-03-11 14:24:34 +01:00 |
dr. M.S. (Matthijs) Berends
|
4416394e10
|
website update
|
2023-02-26 21:26:58 +01:00 |
dr. M.S. (Matthijs) Berends
|
2c5a9bb622
|
new relative episode determination in `get_episode()`, fix for plotting disk/MIC values
|
2023-02-24 17:06:30 +01:00 |
dr. M.S. (Matthijs) Berends
|
049baf0a71
|
fix for antibiograms on R < 3.5
|
2023-02-24 09:43:10 +01:00 |
dr. M.S. (Matthijs) Berends
|
e70f2cd32c
|
knitr format
|
2023-02-23 16:27:40 +01:00 |
dr. M.S. (Matthijs) Berends
|
dad25302f2
|
make `rsi` work in more cases, documentation update
|
2023-02-22 14:38:57 +01:00 |
dr. M.S. (Matthijs) Berends
|
45a9697c84
|
unit tests
|
2023-02-12 17:10:48 +01:00 |
dr. M.S. (Matthijs) Berends
|
c51fb24363
|
pm_bind_rows
|
2023-02-11 22:28:48 +01:00 |
dr. M.S. (Matthijs) Berends
|
b146de6d7f
|
fix for bind_rows2, added 4 langs
|
2023-02-11 21:57:12 +01:00 |
dr. M.S. (Matthijs) Berends
|
bc434db835
|
bring back `antibiogram()`, without deps
|
2023-02-10 16:18:00 +01:00 |
dr. M.S. (Matthijs) Berends
|
aa48c6bf53
|
pm fixes
|
2023-02-08 16:51:41 +01:00 |
dr. M.S. (Matthijs) Berends
|
822e9de82c
|
pm update, unit test fix?
|
2023-02-08 13:48:06 +01:00 |
dr. M.S. (Matthijs) Berends
|
9e99e66f01
|
use dplyr where available, new `antibiogram()` for WISCA, fixed Salmonella Typhi/Paratyphi
|
2023-02-06 11:57:22 +01:00 |
dr. M.S. (Matthijs) Berends
|
19fd0ef121
|
sort sir history
|
2023-01-23 15:01:21 +01:00 |