dr. M.S. (Matthijs) Berends
2e31ec19c3
(v2.1.1.9122) fix documentation
2024-12-20 10:52:44 +01:00
dr. M.S. (Matthijs) Berends
15fc72fc66
(v2.1.1.9121) support tidymodels
2024-12-19 20:17:15 +01:00
dr. M.S. (Matthijs) Berends
7e7db6bb81
support for Dutch national MDR guideline
2024-12-15 20:15:52 +01:00
dr. M.S. (Matthijs) Berends
d7de1bc33d
(v2.1.1.9118) move ggplot2 plotting functions to general 'plotting' man page
2024-12-14 19:41:15 +01:00
dr. M.S. (Matthijs) Berends
175a6777f3
(v2.1.1.9116) selectors as separate functions
2024-12-13 09:44:54 +01:00
dr. M.S. (Matthijs) Berends
419cb5b9c4
(v2.1.1.9112) unit test
2024-12-06 18:01:54 +01:00
dr. M.S. (Matthijs) Berends
0488d00f20
(v2.1.1.9111) add betalactams_with_inhibitor(), fixes #175
2024-12-06 15:44:20 +01:00
dr. M.S. (Matthijs) Berends
5c4d8fcd2a
(v2.1.1.9095) Python support
2024-10-15 17:12:55 +02:00
dr. M.S. (Matthijs) Berends
50a9f8f0e0
(v2.1.1.9086) website update
2024-10-02 10:20:05 +02:00
dr. M.S. (Matthijs) Berends
681fe011fe
(v2.1.1.9082) algorithm updates
2024-09-30 18:46:55 +02:00
dr. M.S. (Matthijs) Berends
ac1c40d8bb
(v2.1.1.9081) HUGE microorganisms update for fungi!
2024-09-29 22:17:56 +02:00
dr. M.S. (Matthijs) Berends
a558f4c121
(v2.1.1.9080) fix rescale_mic() for an outside MIC range
2024-09-24 22:39:40 +02:00
dr. M.S. (Matthijs) Berends
1ca40e8d67
(v2.1.1.9079) fix for uti in as.sir()
2024-09-24 15:34:12 +02:00
dr. M.S. (Matthijs) Berends
127892430d
(v2.1.1.9078) 12 new formatting formats for antibiogram(), prepare for Bayesian WISCA
2024-09-22 11:45:51 +02:00
dr. M.S. (Matthijs) Berends
ef8ef28650
(v2.1.1.9072)
2024-09-19 11:46:17 +02:00
dr. M.S. (Matthijs) Berends
ddb23b6e73
(v2.1.1.9071) update veterinary SIR interpretation, add only_fungi
2024-09-19 11:44:56 +02:00
dr. M.S. (Matthijs) Berends
83907c9c65
add files (no-verify)
2024-07-17 14:31:09 +02:00
dr. M.S. (Matthijs) Berends
ff03bb6471
(v2.1.1.9065) unit tests 2
2024-07-16 15:58:18 +02:00
dr. M.S. (Matthijs) Berends
640888f408
(v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update
2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends
c67d003e9e
(v2.1.1.9060) SDD results now in as.sir()
2024-06-19 15:08:23 +02:00
dr. M.S. (Matthijs) Berends
0c3d81f32e
(v2.1.1.9059) documentation fix
2024-06-17 22:26:05 +02:00
dr. M.S. (Matthijs) Berends
a4dc37a4e4
(v2.1.1.9057) fix for missing breakpoints
2024-06-17 16:52:12 +02:00
dr. M.S. (Matthijs) Berends
d9e66fb118
(v2.1.1.9056) example fix
2024-06-17 14:52:18 +02:00
dr. M.S. (Matthijs) Berends
1e65b5a289
(v2.1.1.9055) example fix
2024-06-17 14:36:40 +02:00
dr. M.S. (Matthijs) Berends
13baf8d7be
(v2.1.1.9054) fix examples
2024-06-17 13:52:02 +02:00
dr. M.S. (Matthijs) Berends
2dee1d71dc
(v2.1.1.9053) add verbose to as.sir(), unit test fix
2024-06-17 10:38:45 +02:00
dr. M.S. (Matthijs) Berends
68f7795481
(v2.1.1.9052) unit test fix
2024-06-16 20:53:50 +02:00
dr. M.S. (Matthijs) Berends
4ffac7e22d
(v2.1.1.9051) fix VGS mo code
2024-06-16 11:28:56 +02:00
dr. M.S. (Matthijs) Berends
bdbf5198a2
(v2.1.1.9050) vctrs fix for sir, small documentation fixes
2024-06-15 15:33:49 +02:00
dr. M.S. (Matthijs) Berends
9bf7584d58
(v2.1.1.9049) new 2024 breakpoints, add AMO, set NI instead of N
2024-06-14 22:39:01 +02:00
dr. M.S. (Matthijs) Berends
de17de1be9
(v2.1.1.9048) vctrs update for sir
2024-06-13 20:55:17 +02:00
dr. M.S. (Matthijs) Berends
3179216c81
(v2.1.1.9047) unit test and index
2024-06-13 07:37:53 +02:00
dr. M.S. (Matthijs) Berends
31207952d3
(v2.1.1.9043) fix sir translation with as.double
2024-06-10 10:34:45 +02:00
dr. M.S. (Matthijs) Berends
a3071cf58b
(v2.1.1.9042) update translations and example isolates
2024-06-09 11:31:04 +02:00
dr. M.S. (Matthijs) Berends
af74e1d4f2
(v2.1.1.9041) antibiotics update
2024-06-08 17:35:25 +02:00
dr. M.S. (Matthijs) Berends
c5981cdeb3
fix unit test
2024-06-04 20:17:54 +02:00
dr. M.S. (Matthijs) Berends
7c1b564648
fix SIR interpretation for uti
2024-05-31 21:24:35 +02:00
dr. M.S. (Matthijs) Berends
60c6c21e45
fix SIR interpretation
2024-05-31 09:50:54 +02:00
dr. M.S. (Matthijs) Berends
c3ce1b551d
rename limit_mic_range() to rescale_mic()
2024-05-24 15:07:41 +02:00
dr. M.S. (Matthijs) Berends
d214f74e25
allow column name for ab in as.sir()
2024-05-20 21:29:13 +02:00
dr. M.S. (Matthijs) Berends
08a27922a8
new SDD and N for as.sir()
2024-05-20 15:27:04 +02:00
dr. M.S. (Matthijs) Berends
2899b3c840
new mo_group_members()
2024-04-19 10:18:21 +02:00
dr. M.S. (Matthijs) Berends
0039cb05d6
update MIC comparisons
2024-04-05 16:44:43 +02:00
dr. M.S. (Matthijs) Berends
bc4f8515e2
new Norwegian link
2024-03-03 23:24:57 +01:00
dr. M.S. (Matthijs) Berends
7be4dabbc0
support veterinary MIC/disk translation
2024-02-24 15:16:52 +01:00
Emil Rossing
74ea6c8c60
Added support for 'html' in italicize_taxonomy() ( #134 )
2024-02-13 13:47:07 +01:00
dr. M.S. (Matthijs) Berends
83e92fd88c
docu fix
2023-12-04 08:19:02 +01:00
dr. M.S. (Matthijs) Berends
7059568581
fix scale functions
2023-12-03 16:51:54 +01:00
dr. M.S. (Matthijs) Berends
c7461766ce
Remove RSI from package, add extra MIC scale functions
2023-12-03 11:34:48 +01:00
dr. M.S. (Matthijs) Berends
6f417d0ef2
add scale_x_mic()
2023-12-03 01:06:00 +01:00
