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a0ee86536a unit tests dr. M.S. (Matthijs) Berends 2023-01-05 14:43:18 +01:00
ec8f871100 Built site for AMR: 1.8.2.9076@77d9cf1 github-actions 2022-12-30 12:10:58 +00:00
77d9cf1936 documentation dr. M.S. (Matthijs) Berends 2022-12-30 13:02:37 +01:00
e4ea96cbf9 fix for R < 3.4 dr. M.S. (Matthijs) Berends 2022-12-30 12:57:27 +01:00
6a000be49b Built site for AMR: 1.8.2.9074@1db74e8 github-actions 2022-12-29 15:31:17 +00:00
1db74e86cd good start-up practice dr. M.S. (Matthijs) Berends 2022-12-29 16:23:57 +01:00
d81e09bddd Built site for AMR: 1.8.2.9073@61c0bdb github-actions 2022-12-28 14:12:34 +00:00
61c0bdb7af documentation dr. M.S. (Matthijs) Berends 2022-12-28 15:04:59 +01:00
2c1a204ab6 Built site for AMR: 1.8.2.9072@ba3b237 github-actions 2022-12-28 13:27:31 +00:00
ba3b237bdf custom mo update dr. M.S. (Matthijs) Berends 2022-12-28 14:20:10 +01:00
e731388cb5 Built site for AMR: 1.8.2.9071@fe09e92 github-actions 2022-12-27 15:14:41 +00:00
fe09e9252b custom mo update dr. M.S. (Matthijs) Berends 2022-12-27 16:03:03 +01:00
f619fb683b support new mo codes dr. M.S. (Matthijs) Berends 2022-12-27 15:16:15 +01:00
b3effa8a4e Built site for AMR: 1.8.2.9069@e493248 github-actions 2022-12-21 08:22:11 +00:00
e493248ea5 unit test and news file dr. M.S. (Matthijs) Berends 2022-12-21 09:12:53 +01:00
e81f9bcf5e Built site for AMR: 1.8.2.9068@4c42a43 github-actions 2022-12-20 21:48:55 +00:00
4c42a43f7d fixes dr. M.S. (Matthijs) Berends 2022-12-20 22:41:39 +01:00
8cd53d7ba4 Built site for AMR: 1.8.2.9067@6f4bb60 github-actions 2022-12-20 21:28:07 +00:00
6f4bb603ec unit tests dr. M.S. (Matthijs) Berends 2022-12-20 22:18:50 +01:00
fe6945bfad Built site for AMR: 1.8.2.9066@f0a2cdb github-actions 2022-12-20 15:22:22 +00:00
f0a2cdbf5e update mo algorithm dr. M.S. (Matthijs) Berends 2022-12-20 16:14:04 +01:00
c5a5383b7b Built site for AMR: 1.8.2.9065@b1b7534 github-actions 2022-12-19 14:40:05 +00:00
b1b7534c78 incorporate Bartlett et al (2022) dr. M.S. (Matthijs) Berends 2022-12-19 15:32:41 +01:00
29c310e535 Built site for AMR: 1.8.2.9064@23fe427 github-actions 2022-12-17 13:39:03 +00:00
23fe427cbc Fixes for Salmonella dr. M.S. (Matthijs) Berends 2022-12-17 14:31:33 +01:00
d247365476 Built site for AMR: 1.8.2.9063@5f3a769 github-actions 2022-12-16 15:17:49 +00:00
5f3a7694aa microorganisms update, added Salmonella groups dr. M.S. (Matthijs) Berends 2022-12-16 16:10:43 +01:00
64384886d7 Built site for AMR: 1.8.2.9062@8da2467 github-actions 2022-12-11 23:23:03 +00:00
8da2467209 updated taxonomy dr. M.S. (Matthijs) Berends 2022-12-12 00:14:56 +01:00
7b50c6e9f7 Built site for AMR: 1.8.2.9061@eed1c14 github-actions 2022-12-11 10:50:34 +00:00
eed1c14b96 website update dr. M.S. (Matthijs) Berends 2022-12-11 11:44:29 +01:00
100f3d6fe0 Built site for AMR: 1.8.2.9060@b1ead9c github-actions 2022-12-10 09:16:44 +00:00
b1ead9c0fe doc update dr. M.S. (Matthijs) Berends 2022-12-10 10:09:57 +01:00
4dff2dbe6b Built site for AMR: 1.8.2.9059@e7d7b94 github-actions 2022-12-09 14:17:23 +00:00
e7d7b94b3e no obligatory note on startup dr. M.S. (Matthijs) Berends 2022-12-09 15:10:49 +01:00
09ffdc91e6 Built site for AMR: 1.8.2.9058@56dad34 github-actions 2022-12-09 12:44:45 +00:00
56dad34e68 update prevalence with new phyla dr. M.S. (Matthijs) Berends 2022-12-09 13:37:08 +01:00
d6a732817a Built site for AMR: 1.8.2.9057@ac55aa8 github-actions 2022-12-09 10:27:21 +00:00
ac55aa84de add news dr. M.S. (Matthijs) Berends 2022-12-09 11:15:11 +01:00
510140fc55 Updated mo_gramstain() to reflect current taxonomy, fixes #83 dr. M.S. (Matthijs) Berends 2022-12-09 10:30:25 +01:00
a153eb2626 Built site for AMR: 1.8.2.9054@6017f81 github-actions 2022-11-29 18:45:20 +00:00
6017f81e74 Update README.md Dr. Matthijs Berends 2022-11-29 19:38:17 +01:00
0bc2afafe9 Built site for AMR: 1.8.2.9054@ba51c2d github-actions 2022-11-28 18:48:45 +00:00
ba51c2d92f add column to as.mic() and as.disk() warnings dr. M.S. (Matthijs) Berends 2022-11-28 19:39:52 +01:00
8c6795ca53 Built site for AMR: 1.8.2.9053@31fb81c github-actions 2022-11-24 19:37:19 +00:00
31fb81c382 revised as.rsi(), fix for mdro() dr. M.S. (Matthijs) Berends 2022-11-24 20:29:00 +01:00
a994768452 Built site for AMR: 1.8.2.9052@05d536e github-actions 2022-11-17 14:32:57 +00:00
05d536ebb7 complexes dr. M.S. (Matthijs) Berends 2022-11-17 15:23:29 +01:00
4b476d056c Built site for AMR: 1.8.2.9051@f6862a1 github-actions 2022-11-14 14:27:45 +00:00
f6862a139d expert rules 12.0 dr. M.S. (Matthijs) Berends 2022-11-14 15:20:39 +01:00
eb998f6989 Built site for AMR: 1.8.2.9050@7ca44fb github-actions 2022-11-13 12:52:01 +00:00
7ca44fb756 cleanup and new intro logo dr. M.S. (Matthijs) Berends 2022-11-13 13:44:25 +01:00
bdc43910ae Built site for AMR: 1.8.2.9049@496c08d github-actions 2022-11-13 07:54:32 +00:00
496c08d851 Implement extensive support for antiviral agents support (#77) Dr. Matthijs Berends 2022-11-13 08:46:10 +01:00
6fd5ff2a24 Built site for AMR: 1.8.2.9047@d2edcf5 github-actions 2022-11-12 11:17:17 +00:00
d2edcf51ad Update website.yaml Dr. Matthijs Berends 2022-11-12 12:10:33 +01:00
68a0b3f94a Built site for AMR: 1.8.2.9047@8d1679b github-actions 2022-11-12 08:52:06 +00:00
8d1679bab3 website update dr. M.S. (Matthijs) Berends 2022-11-12 09:44:36 +01:00
d31b599825 Built site for AMR: 1.8.2.9046@af205e2 github-actions 2022-11-10 21:16:02 +00:00
af205e2705 update collabs dr. M.S. (Matthijs) Berends 2022-11-10 22:07:35 +01:00
7fe29a8401 Built site for AMR: 1.8.2.9045@d2ceebe github-actions 2022-11-07 17:57:12 +00:00
d2ceebe376 website fix dr. M.S. (Matthijs) Berends 2022-11-07 18:48:12 +01:00
f74da6c86a Built site for AMR: 1.8.2.9044@2d90218 github-actions 2022-11-05 11:15:23 +00:00
2d90218305 documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 12:06:40 +01:00
863a83ee08 Built site for AMR: 1.8.2.9043@8dc94a9 github-actions 2022-11-05 08:39:06 +00:00
8dc94a9eda documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 09:31:19 +01:00
b248bcc62a Built site for AMR: 1.8.2.9042@3b65298 github-actions 2022-11-05 07:26:59 +00:00
3b652983b7 documentation fix dr. M.S. (Matthijs) Berends 2022-11-05 08:18:06 +01:00
40b8ed3a1a Built site for AMR: 1.8.2.9041@d20caae github-actions 2022-10-31 12:32:32 +00:00
d20caae54b cleanup dr. M.S. (Matthijs) Berends 2022-10-31 13:25:41 +01:00
90b951a48a Built site for AMR: 1.8.2.9040@796b972 github-actions 2022-10-31 10:28:18 +00:00
796b972f8a extend vctrs support dr. M.S. (Matthijs) Berends 2022-10-31 11:19:06 +01:00
05ea686a1e Built site for AMR: 1.8.2.9039@9444ed6 github-actions 2022-10-30 20:14:42 +00:00
9444ed6d1d fix antibiotics error dr. M.S. (Matthijs) Berends 2022-10-30 21:05:46 +01:00
ec6f7db383 Built site for AMR: 1.8.2.9038@d40e0ef github-actions 2022-10-30 13:40:31 +00:00
d40e0ef20b completely updated antibiotics dr. M.S. (Matthijs) Berends 2022-10-30 14:31:45 +01:00
0d936e8905 Built site for AMR: 1.8.2.9037@3d9faf8 github-actions 2022-10-29 17:07:26 +00:00
3d9faf89cf ATC and DDD update dr. M.S. (Matthijs) Berends 2022-10-29 19:01:23 +02:00
fa620f8ebd fix export of lists in antibiotics and antivirals dr. M.S. (Matthijs) Berends 2022-10-29 16:17:48 +02:00
f988c3273a Built site for AMR: 1.8.2.9035@afdc48d github-actions 2022-10-29 14:16:17 +00:00
afdc48db1e fix txt export of microorganisms dr. M.S. (Matthijs) Berends 2022-10-29 16:08:18 +02:00
9a91fdfb99 Built site for AMR: 1.8.2.9034@6ad7857 github-actions 2022-10-29 12:24:08 +00:00
6ad7857d39 fix missing R breakpoints dr. M.S. (Matthijs) Berends 2022-10-29 14:15:23 +02:00
8438e68df5 Built site for AMR: 1.8.2.9033@c2801ba github-actions 2022-10-22 20:10:04 +00:00
c2801ba7a1 new rsi_translation dr. M.S. (Matthijs) Berends 2022-10-22 22:00:15 +02:00
8211647fb0 Built site for AMR: 1.8.2.9032@d10651e github-actions 2022-10-22 08:25:54 +00:00
d10651eb26 cleanup dr. M.S. (Matthijs) Berends 2022-10-22 10:20:09 +02:00
560396124f Built site for AMR: 1.8.2.9031@d0b54f6 github-actions 2022-10-21 20:03:48 +00:00
d0b54f640c Update contributors list dr. M.S. (Matthijs) Berends 2022-10-21 21:56:54 +02:00
bfca21bd3f precommit update dr. M.S. (Matthijs) Berends 2022-10-21 19:31:46 +02:00
b45431b86c Built site for AMR: 1.8.2.9029@faca6d6 github-actions 2022-10-21 14:31:02 +00:00
faca6d608a mean AMR distance dr. M.S. (Matthijs) Berends 2022-10-21 16:02:14 +02:00
178ab5e5ff mean AMR distance dr. M.S. (Matthijs) Berends 2022-10-21 15:59:31 +02:00
9667f42d3b Built site for AMR: 1.8.2.9027@4bebba3 github-actions 2022-10-21 13:19:49 +00:00
4bebba3610 fix for scoped dplyr verbs dr. M.S. (Matthijs) Berends 2022-10-21 15:13:19 +02:00
49a3324340 Built site for AMR: 1.8.2.9024@3102beb github-actions 2022-10-21 08:06:38 +00:00
3102beb241 Update check-release.yaml Dr. Matthijs Berends 2022-10-21 09:59:09 +02:00
ca3fb70197 Built site for AMR: 1.8.2.9024@74bcc41 github-actions 2022-10-20 17:46:07 +00:00
74bcc41558 Move older test versions to Windows Dr. Matthijs Berends 2022-10-20 19:39:25 +02:00
f137d1a9e0 Built site for AMR: 1.8.2.9024@aa2c063 github-actions 2022-10-20 14:14:41 +00:00