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6f4bb603ec
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unit tests
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2022-12-20 22:18:50 +01:00 |
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b1b7534c78
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incorporate Bartlett et al (2022)
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2022-12-19 15:32:41 +01:00 |
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23fe427cbc
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Fixes for Salmonella
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2022-12-17 14:31:33 +01:00 |
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5f3a7694aa
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microorganisms update, added Salmonella groups
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2022-12-16 16:10:43 +01:00 |
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31fb81c382
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revised as.rsi(), fix for mdro()
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2022-11-24 20:29:00 +01:00 |
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05d536ebb7
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complexes
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2022-11-17 15:23:29 +01:00 |
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d40e0ef20b
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completely updated antibiotics
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2022-10-30 14:31:45 +01:00 |
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c2801ba7a1
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new rsi_translation
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2022-10-22 22:00:15 +02:00 |
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85e2fbe4a3
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remove warnings from unit tests
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2022-10-19 11:47:57 +02:00 |
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f203928f7e
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coercion fixes
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2022-10-19 06:59:36 +02:00 |
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76bcd3528c
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move object assignment to AMR_env
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2022-10-14 13:02:50 +02:00 |
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43c638d122
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add mo_current()
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2022-10-10 10:12:08 +02:00 |
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b9342d103e
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fix documentation
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2022-10-06 11:33:30 +02:00 |
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Dr. Matthijs Berends
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cd2acc4a29
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New mo algorithm, prepare for 2.0
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2022-10-05 09:12:22 +02:00 |
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71db246d5c
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unit test fix
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2022-08-28 19:17:12 +02:00 |
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4d050aef7c
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styled, unit test fix
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2022-08-28 10:31:50 +02:00 |
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303d61b473
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new tibble export
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2022-08-27 20:49:37 +02:00 |
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952d16de33
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new, automated website
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2022-08-21 16:37:20 +02:00 |
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3f2f60ab77
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language updates
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2022-08-19 12:33:14 +02:00 |
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7f981e7778
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(v1.8.1.9013) add Toxoplasma
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2022-06-10 13:15:23 +02:00 |
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7b0f1596bd
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(v1.8.0.9010) as.mo improvement
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2022-03-15 17:35:02 +01:00 |
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3b2b2be5f8
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(v1.8.0.9002) as.rsi() cleanup, more informative warnings
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2022-03-02 15:38:55 +01:00 |
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18e8525d10
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(v1.8.0.9001) as.mo improvement, fixes #52
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2022-02-26 21:58:23 +01:00 |
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25cef46c59
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(v1.8.0) prerelease 1.8.0
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2021-12-23 18:56:28 +01:00 |
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d9274bcd0a
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(v1.7.1.9075) assignment operator
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2021-12-14 22:59:27 +01:00 |
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76dee66852
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(v1.7.1.9074) as.mo() improvement, ASCII replacements for unit tests
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2021-12-14 22:39:23 +01:00 |
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bd4bb1d72f
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(v1.7.1.9073) as.rsi() fix for UTIs
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2021-12-14 21:47:14 +01:00 |
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578e7dfee9
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(v1.7.1.9070) Better WHONET support
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2021-12-13 10:18:28 +01:00 |
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f90e27c1b0
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(v1.7.1.9069) CLSI 2021 support
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2021-12-12 11:36:58 +01:00 |
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56f1ce328a
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(v1.7.1.9067) Support for Swedish and Russian
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2021-12-12 09:42:03 +01:00 |
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77ba4318ea
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(v1.7.1.9064) eucast 3.3 for mdro(), major change to repeated calling
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2021-12-11 13:41:31 +01:00 |
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37e6e35ec4
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(v1.7.1.9051) updated taxonomy, updated git branch name
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2021-10-06 13:23:57 +02:00 |
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8f5e5a3fc2
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(v1.7.1.9050) fix for as.mo
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2021-10-05 14:00:35 +02:00 |
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2bcf28281d
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(v1.7.1.9049) unit tests
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2021-10-05 09:58:08 +02:00 |
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a2d249962f
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(v1.7.1.9023) Removed filter_ functions, new set_ab_names(), ATC code update, ab selector update, fixes #46 and fixed #47
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2021-08-16 21:54:34 +02:00 |
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b228eb1536
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(v1.7.1.9016) only_treatable ab selectors
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2021-07-08 22:23:28 +02:00 |
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625a6fb304
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(v1.7.1.9015) removed S3 taxonomic_name again
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2021-07-07 20:34:05 +02:00 |
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d04e83f494
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(v1.7.1.9005) ab class selectors for R-3.0 and R-3.1
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2021-06-22 12:16:42 +02:00 |
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c44d9392ca
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(v1.7.1.9004) more extensive unit tests
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2021-06-15 10:51:04 +02:00 |
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99be4c7e7e
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(v1.7.1.9002) ab class selectors update
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2021-06-14 22:04:04 +02:00 |
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1908e7cc7a
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(v1.7.1.9000) ab_class update, unit tests
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2021-06-04 21:07:55 +02:00 |
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bef0f42f66
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(v1.7.0.9001) CLSI 2020 guideline
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2021-06-01 15:33:06 +02:00 |
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f406319503
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(v1.7.0.9000) package size
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2021-05-30 22:14:38 +02:00 |
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be49131ed7
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(v1.6.0.9043) translation update
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2021-05-17 19:43:01 +02:00 |
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83fec69a03
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(v1.6.0.9042) translation update
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2021-05-17 11:26:12 +02:00 |
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29dbfa2f49
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(v1.6.0.9021) join functions update
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2021-05-12 18:15:03 +02:00 |
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3319fbae58
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(v1.6.0.9020) fix for skimr in dplyr 1.0.6
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2021-05-06 15:17:11 +02:00 |
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f33e61bac7
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(v1.6.0.9016) website update and c() fixes
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2021-05-03 13:06:43 +02:00 |
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70b803dbb6
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(v1.6.0.9008) unlike, bugfix for col_mo naming
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2021-04-23 09:59:36 +02:00 |
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c6289c3fc3
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(v1.6.0.9007) documentation custom eucast rules, progress bar as.mo
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2021-04-20 10:46:17 +02:00 |
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7a3139f7cc
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(v1.6.0.9000) custom EUCAST rules
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2021-04-07 08:37:42 +02:00 |
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4e0a9533ad
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(v1.5.0.9041) SNOMED update
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2021-03-11 21:42:30 +01:00 |
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91dd755cac
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(v1.5.0.9031) math processing of MICs
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2021-03-05 15:36:39 +01:00 |
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ddf88345f1
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(v1.5.0.9028) Updated taxonomy until March 2021
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2021-03-04 23:28:32 +01:00 |
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1737d56ae4
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(v1.5.0.9026) vignette update, support for GISA
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2021-02-25 12:31:12 +01:00 |
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31ceba5441
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(v1.5.0.9024) more speed improvements
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2021-02-22 20:21:33 +01:00 |
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0fdabff1ba
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(v1.5.0.9023) mo properties speed improvement
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2021-02-21 23:19:40 +01:00 |
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062c49fca1
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(v1.5.0.9022) mo properties speed improvement
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2021-02-21 22:56:35 +01:00 |
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5ef8cb41a7
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(v1.5.0.9021) improve speed of %like%
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2021-02-21 20:15:09 +01:00 |
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daa12ced2c
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(v1.5.0.9020) translation fix
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2021-02-18 23:23:14 +01:00 |
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601ea7377c
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(v1.5.0.9019) use functions without loading AMR pkg
|
2021-02-17 10:58:13 +01:00 |
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8fda473e49
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(v1.5.0.9015) unit test fix, grouped first isolates
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2021-02-04 16:48:16 +01:00 |
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2eca8c3f01
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(v1.5.0.9014) only_rsi_columns, is.rsi.eligible improvement
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2021-02-02 23:57:35 +01:00 |
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20d638c193
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(v1.5.0.9013) updated tibble printing colours
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2021-01-28 16:09:30 +01:00 |
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331c1f6508
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(v1.5.0.9012) ampc_cephalosporin_resistance for I
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2021-01-25 21:58:00 +01:00 |
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286eaa9699
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(v1.5.0.9010) MDRO vignette update, get_episode for < day
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2021-01-24 14:48:56 +01:00 |
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4eab095306
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(v1.5.0.9006) major documentation update
|
2021-01-18 16:57:56 +01:00 |
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d014955ce0
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(v.1.5.0.9000) implementation of EUCAST rules v11 (2021)
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2021-01-12 22:08:04 +01:00 |
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3b84b8be75
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v1.5.0
|
2021-01-06 11:16:17 +01:00 |
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d3f007bf65
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(v1.4.0.9053) unit test old R versions
|
2020-12-29 21:23:01 +01:00 |
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afc325c314
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(v1.4.0.9050) ab selectors base R
|
2020-12-27 20:32:40 +01:00 |
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8b52f9b1be
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(v1.4.0.9047) unit tests
|
2020-12-27 00:30:28 +01:00 |
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acbd0cf7ca
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(v1.4.0.9046) get_episode
|
2020-12-27 00:07:00 +01:00 |
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df37584189
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(v1.4.0.9044) mo tibble printing, mo_shortname() fix
|
2020-12-24 23:29:10 +01:00 |
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128ebcfd62
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(v1.4.0.9043) documentation update
|
2020-12-22 00:51:17 +01:00 |
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81af41da3a
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(v1.4.0.9041) updates based on review
|
2020-12-17 16:22:25 +01:00 |
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1faa816090
|
(v1.4.0.9040) LA-MRSA / CA-MRSA
|
2020-12-16 16:18:53 +01:00 |
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2edd3339db
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(v1.4.0.9036) more unit tests
|
2020-12-11 12:17:23 +01:00 |
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e03b3c96d3
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(v1.4.0.9030) as.mo() fix for known lab codes
|
2020-12-03 16:59:04 +01:00 |
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deefce9520
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(v1.4.0.9021) more robust class setting
|
2020-11-16 16:57:55 +01:00 |
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05fb213a7c
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(v1.4.0.9020) mo_is_intrinsic_resistant
|
2020-11-16 11:03:24 +01:00 |
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01d9522434
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(v1.4.0.9017) stringsAsFactors definitions
|
2020-11-11 16:49:27 +01:00 |
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15c732703d
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(v1.4.0.9015) bugfix
|
2020-11-10 16:35:56 +01:00 |
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dd5a0319ef
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(v1.4.0.9014) bugfix
|
2020-11-09 15:18:36 +01:00 |
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d3b1d33210
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(v1.4.0.9013) is_gram_negative/positive update
|
2020-11-09 13:07:02 +01:00 |
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423879c034
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(v1.4.0.9012) reference_df fix
|
2020-11-05 01:11:49 +01:00 |
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5a607abb36
|
(v1.4.0.9011) message formatting
|
2020-10-27 15:56:51 +01:00 |
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3d096d96c2
|
(v1.4.0.9009) bugfix for older R version
|
2020-10-26 15:53:31 +01:00 |
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760d69a3e0
|
(v1.4.0.9008) like variations
|
2020-10-26 12:23:03 +01:00 |
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2ef7dfc8a3
|
(v1.4.0.9003) CoNS update
|
2020-10-20 21:00:57 +02:00 |
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ddae8085e1
|
(v1.4.0.9002) bugfix
|
2020-10-19 20:44:45 +02:00 |
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4e9ccb4435
|
(v1.4.0.9001) is_gram_positive(), is_gram_negative(), parameter hardening
|
2020-10-19 17:09:19 +02:00 |
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28e77680c5
|
(v1.4.0) matching score update
|
2020-10-08 11:16:03 +02:00 |
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baf510183c
|
(v1.3.0.9038) prefinal 1.4.0
|
2020-10-04 19:26:43 +02:00 |
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4e0374af29
|
(v1.3.0.9035) mdro() for EUCAST 3.2, examples cleanup
|
2020-09-29 23:35:46 +02:00 |
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36ec8b0d81
|
(v1.3.0.9033) skimr fix
|
2020-09-28 11:00:59 +02:00 |
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519aada54f
|
(v1.3.0.9032) support skimr
|
2020-09-28 01:08:55 +02:00 |
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22f6ceb3e4
|
(v1.3.0.9031) matching score update
|
2020-09-26 16:51:17 +02:00 |
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050a9a04fb
|
(v1.3.0.9030) matching score update
|
2020-09-26 16:26:01 +02:00 |
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9667c2994f
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(v1.3.0.9029) eucast rules fix, unique()
|
2020-09-25 14:44:50 +02:00 |
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