Commit Graph

1010 Commits

Author SHA1 Message Date
dr. M.S. (Matthijs) Berends ff03bb6471 (v2.1.1.9065) unit tests 2 2024-07-16 15:58:18 +02:00
dr. M.S. (Matthijs) Berends 7f344836ea (v2.1.1.9064) unit tests 2024-07-16 15:55:58 +02:00
dr. M.S. (Matthijs) Berends 640888f408 (v2.1.1.9064) update all microbial taxonomy, add mycobank, big documentation update 2024-07-16 14:53:17 +02:00
dr. M.S. (Matthijs) Berends 82585901a7 (v2.1.1.9061) animal host fix 2024-06-19 15:41:45 +02:00
dr. M.S. (Matthijs) Berends c67d003e9e (v2.1.1.9060) SDD results now in `as.sir()` 2024-06-19 15:08:23 +02:00
dr. M.S. (Matthijs) Berends 0c3d81f32e (v2.1.1.9059) documentation fix 2024-06-17 22:26:05 +02:00
dr. M.S. (Matthijs) Berends 1bc2e04e1c (v2.1.1.9058) fix hosts, add translations 2024-06-17 22:19:38 +02:00
dr. M.S. (Matthijs) Berends a4dc37a4e4 (v2.1.1.9057) fix for missing breakpoints 2024-06-17 16:52:12 +02:00
dr. M.S. (Matthijs) Berends d9e66fb118 (v2.1.1.9056) example fix 2024-06-17 14:52:18 +02:00
dr. M.S. (Matthijs) Berends 1e65b5a289 (v2.1.1.9055) example fix 2024-06-17 14:36:40 +02:00
dr. M.S. (Matthijs) Berends 13baf8d7be (v2.1.1.9054) fix examples 2024-06-17 13:52:02 +02:00
dr. M.S. (Matthijs) Berends 2dee1d71dc (v2.1.1.9053) add `verbose` to `as.sir()`, unit test fix 2024-06-17 10:38:45 +02:00
dr. M.S. (Matthijs) Berends 68f7795481 (v2.1.1.9052) unit test fix 2024-06-16 20:53:50 +02:00
dr. M.S. (Matthijs) Berends bdbf5198a2 (v2.1.1.9050) vctrs fix for `sir`, small documentation fixes 2024-06-15 15:33:49 +02:00
dr. M.S. (Matthijs) Berends 9bf7584d58 (v2.1.1.9049) new 2024 breakpoints, add `AMO`, set NI instead of N 2024-06-14 22:39:01 +02:00
dr. M.S. (Matthijs) Berends de17de1be9 (v2.1.1.9048) vctrs update for sir 2024-06-13 20:55:17 +02:00
dr. M.S. (Matthijs) Berends c753afcd76 (v2.1.1.9045) fix host in animal guidelines 2024-06-12 10:32:43 +02:00
dr. M.S. (Matthijs) Berends 31207952d3 (v2.1.1.9043) fix sir translation with as.double 2024-06-10 10:34:45 +02:00
dr. M.S. (Matthijs) Berends a3071cf58b (v2.1.1.9042) update translations and example isolates 2024-06-09 11:31:04 +02:00
dr. M.S. (Matthijs) Berends af74e1d4f2 (v2.1.1.9041) antibiotics update 2024-06-08 17:35:25 +02:00
dr. M.S. (Matthijs) Berends c5981cdeb3 fix unit test 2024-06-04 20:17:54 +02:00
dr. M.S. (Matthijs) Berends 7c1b564648 fix SIR interpretation for uti 2024-05-31 21:24:35 +02:00
dr. M.S. (Matthijs) Berends 60c6c21e45 fix SIR interpretation 2024-05-31 09:50:54 +02:00
dr. M.S. (Matthijs) Berends ba4dc20cf3 autoplot fix 2024-05-30 16:39:59 +02:00
dr. M.S. (Matthijs) Berends d4490c7f25 fix sorting of MICs, MIC autoplot titles 2024-05-30 15:50:17 +02:00
dr. M.S. (Matthijs) Berends c3ce1b551d rename `limit_mic_range()` to `rescale_mic()` 2024-05-24 15:07:41 +02:00
dr. M.S. (Matthijs) Berends d214f74e25 allow column name for `ab` in `as.sir()` 2024-05-20 21:29:13 +02:00
dr. M.S. (Matthijs) Berends fc269e667d unit test fix 2024-05-20 18:58:35 +02:00
dr. M.S. (Matthijs) Berends 08a27922a8 new SDD and N for `as.sir()` 2024-05-20 15:27:04 +02:00
dr. M.S. (Matthijs) Berends b68f47d985 improved algorithm of `as.ab()` 2024-05-12 16:24:44 +02:00
dr. M.S. (Matthijs) Berends 1bce7ed3d3 fix git hooks 2024-04-24 11:58:16 +02:00
dr. M.S. (Matthijs) Berends 7f18e66c4e unit test fix 2024-04-24 11:42:43 +02:00
dr. M.S. (Matthijs) Berends 3e5c7d45c6 update intro logo 2024-04-24 09:58:24 +02:00
dr. M.S. (Matthijs) Berends 25089e811e correct for high-level abx 2024-04-24 09:50:32 +02:00
dr. M.S. (Matthijs) Berends 0d8a91db49 rename pre-commit hook to pre-commit checks (no-check) 2024-04-23 10:55:48 +02:00
dr. M.S. (Matthijs) Berends 35f095cceb fixes #148 2024-04-23 09:34:05 +02:00
dr. M.S. (Matthijs) Berends 2899b3c840 new `mo_group_members()` 2024-04-19 10:18:21 +02:00
dr. M.S. (Matthijs) Berends 94e9a4d99b update MIC implementation 2024-04-07 20:22:59 +02:00
dr. M.S. (Matthijs) Berends 0039cb05d6 update MIC comparisons 2024-04-05 16:44:43 +02:00
dr. M.S. (Matthijs) Berends bc4f8515e2 new Norwegian link 2024-03-03 23:24:57 +01:00
dr. M.S. (Matthijs) Berends f2d245b0cb update navbar colours 2024-03-03 19:07:09 +01:00
dr. M.S. (Matthijs) Berends b303662ec6 fix veterinary for R<4 2024-02-24 19:26:35 +01:00
dr. M.S. (Matthijs) Berends 35963ca3dc vctrs fix 2024-02-24 18:51:37 +01:00
dr. M.S. (Matthijs) Berends 4aa5413641 fix unit test 2024-02-24 18:14:50 +01:00
dr. M.S. (Matthijs) Berends 7be4dabbc0 support veterinary MIC/disk translation 2024-02-24 15:16:52 +01:00
Emil Rossing 74ea6c8c60
Added support for 'html' in italicize_taxonomy() (#134) 2024-02-13 13:47:07 +01:00
dr. M.S. (Matthijs) Berends 83e92fd88c docu fix 2023-12-04 08:19:02 +01:00
dr. M.S. (Matthijs) Berends 7059568581 fix scale functions 2023-12-03 16:51:54 +01:00
dr. M.S. (Matthijs) Berends c7461766ce Remove RSI from package, add extra MIC scale functions 2023-12-03 11:34:48 +01:00
dr. M.S. (Matthijs) Berends 6f417d0ef2 add `scale_x_mic()` 2023-12-03 01:06:00 +01:00